Dermacentor albipictus (winter tick): 139054731
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Entry
139054731 CDS
T11267
Symbol
Polr2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03020
RNA polymerase
dalb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
139054731 (Polr2A)
09124 Replication and repair
03420 Nucleotide excision repair
139054731 (Polr2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dalb03021
]
139054731 (Polr2A)
03400 DNA repair and recombination proteins [BR:
dalb03400
]
139054731 (Polr2A)
Enzymes [BR:
dalb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
139054731 (Polr2A)
Transcription machinery [BR:
dalb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
139054731 (Polr2A)
DNA repair and recombination proteins [BR:
dalb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
139054731 (Polr2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
139054731
NCBI-ProteinID:
XP_070388378
LinkDB
All DBs
Position
1:complement(429240898..429298055)
Genome browser
AA seq
1942 aa
AA seq
DB search
MSQIVTSDSKAPLREVKRVQFGILSPDEIRRMSVTEGGIRYPEIYEGGRPKLGGLMDPRQ
GVIDRTSRCQTCAGNMTECPGHFGHIDLAKPVFHCGFLTKTIKILRCVCFYCSKLLVNPN
NPKIKEIAGKTKGQPRKRLAHVYDLCKGKNICEGGDEIDTKLGPDSQVQEDTNKKQGHGG
CGRYQPSIRRSGLDLTAEWKHINEDSQEKKIVLTAERVWEILKHISEEECVILGMDPRYA
KPDWMLVTVLPVPPLAVRPAVVMFGSARNQDDLTHKLADIVKANNELLRNEQAGAAAHII
AENIKMLQFHVATLVDNEMPGLPRAMQKSGRPLKSIKQRLKSKEGRIRGNLMGKRVDFSA
RTVITPDPNLRINEVGVPRSIAQNLTFPEIVTPFNIDKMHDLVRRGNNQYPGAKYIIRDN
GERIDLRFHPKASDLHLQCGYRVERHVRDGDIIVFNRQPTLHKMSMMGHKIKVLPWSTFR
MNLSVTTPYNADFDGDEMNLHVPQSLETRAEVEQLAMVPRQIITPQSNKPVMGIVQDTLT
AVRKMTKRDIFLEKDQMMTILMFLPIWDGKMPMPAVLKPKPLWTGKQIFSLIIPGNVNLI
RTHSTHPDEEDDGPYKWISPGDTKVLIEHGELISGIVCKKTVGASSGSLMHVVFAELGHE
VAGAFYGHIQTVVNAWLLLEGHTIGIGDTIADKQTFIDIKNTIEKAKHDVIDVIEKAHND
ELEPSPGNTLRQTFENQVNRILNDARDKTGASAQKSLSEFNNFKAMVVSGAKGSKINISQ
VIACVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGG
REGLIDTAVKTAETGYIQRRLIKAMESVMIAYDGTVRNSNGQVIQLRYGEDGLDGGTVEF
QSMPTLKPSNKSFEKKFRFDTCNERYLRKVFTEDVVRELMGSATAVSELEKEWERLRKDR
EILRTIFPTGDSKVVLPCNLQRMLWNAQKIFRVNLRAPTDLSPLRVVQGVEELVKKLVIV
PGEDHLSIQANENATFLFRALLRATLCSKRVAEEFRLSTESFEWLLGEIETRFHQSQGQP
GEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKKPKTPSLTVFL
TGAAARDAEKAKDVLCRLEHTTLRKVTANTAIYYDPDPQNTVISEDQEFVNVYYEMPDFD
PTRISPWLLRVELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMN
SDDGKFQDEEEQVDKMEDDVFLRCIEANMLSDMTLQGIEAITKVYMHLPTTDNKKRIVLT
ETGEFKAIAEWLLETDGTSLMRVLSERDVDPVRTYSNDICEIFAVLGIEAVRKAVEKEMN
HVISFDGSYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAA
SHAEVDFLKGVSENIIMGQLARMGTGAFDLMLDAEKCKYGIEIPMNLPGMMGSLCGPGVF
FGSAATPMAGMSPQMTPWATGATPAYGSGWSPNVGSGMTPGGAGFSPSASSDASGFSPGA
CSPAWSPQPGSPASSPASPYIPSPSSPNYSPSSPAYAPSSPSLTPASPTYSPTSPSYSPT
SPSYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYS
PGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSP
QYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPG
YSPSSPTYSPTSPNIEEDSDND
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagatcgtgacctccgactcgaaggctcccttgcgggaggtgaagagggtgcag
tttggcatcctcagccccgatgaaatacggcgcatgtcagtgacggaagggggcatcagg
tatcctgaaatctatgagggcggcaggcccaagctggggggcctcatggacccccggcaa
ggagtcatcgaccgcacctcgcgatgccagacgtgcgcgggcaatatgactgagtgccct
ggccactttggccacattgacctggccaagccggtgttccactgtggcttcctcaccaag
accatcaagatactgcgatgcgtgtgcttctactgctcgaagctgctcgtcaaccccaac
aatcccaagatcaaggaaatcgcaggcaagacgaaggggcagccacgcaaacgtctggca
cacgtctatgacctctgcaaaggcaagaacatttgcgagggaggtgatgaaatcgacacc
aagctcgggcctgacagccaggttcaggaggacacaaacaaaaagcagggccatggcggt
tgtggccgctaccagccgagcatccgtaggagcggcctggacctgactgcagagtggaag
cacatcaatgaagactctcaggagaagaagattgtcctgacagctgagcgggtctgggag
atcctcaagcatatctcagaggaggagtgcgtgattcttggcatggatcctcgctatgcc
aagcccgactggatgctggtcacagtcctgccggtgcctccactcgctgtgcgcccagct
gtcgtcatgttcggctctgcccggaaccaggatgacttgacacacaaactggccgatatt
gtcaaggcaaacaacgagctgctccgcaatgagcaagctggagcagctgcccacatcatt
gcggagaacatcaagatgcttcagttccatgttgcaaccctggttgacaacgaaatgcct
ggtttaccccgggccatgcaaaaatctggccgtccgctcaagtccatcaagcagcggctg
aaaagcaaagaagggcgcattcgaggcaacctcatgggcaagcgagttgacttttcggcc
cggacggttatcacccccgaccctaacttgcgtatcaacgaggtcggagtacctcgctcc
attgcacagaacctcacctttcccgagatcgtcactccattcaacattgacaaaatgcac
gacttggtgaggcgaggcaacaaccagtaccctggtgccaaatacatcatccgggacaat
ggtgaaagaattgatctccggtttcaccctaaggccagcgaccttcatctccagtgtggc
taccgggtggagcggcacgtccgggacggtgacatcatcgtgttcaaccgtcagccgaca
ctgcacaaaatgtccatgatggggcacaagatcaaggtgctgccttggtccacattccga
atgaacctcagtgtgacaacaccgtacaatgctgattttgacggagacgagatgaacttg
cacgtgccacagtcgctggagacccgtgccgaagtggagcagctggccatggtgccccga
cagattatcacacctcagtccaacaaacccgtcatgggtattgtgcaggacacacttact
gctgtccgaaagatgaccaagcgggacatctttctcgagaaggaccagatgatgacgatt
ctcatgttcttgcctatctgggatggcaagatgcccatgccagctgtactgaaacccaag
cccctgtggacgggcaagcagatcttttcgctcatcattcccggcaatgtgaatcttatc
cgcacgcacagcactcacccggatgaggaggatgatggtccttacaagtggatatcgccg
ggagacaccaaggtgttgattgagcacggggagctgatcagcggcatagtgtgcaagaag
acagtgggtgcctcgtcgggctcactgatgcacgtggtgtttgccgaactgggccacgaa
gtggcaggggccttctacggccacatccagacggtggtcaatgcctggctgcttttggag
ggccacaccatcggtattggcgacaccattgctgacaagcagaccttcatcgacatcaag
aacaccatcgagaaggccaagcacgacgtgatagacgtcatcgagaaggcccacaacgac
gagctggagccctcgccgggaaacaccctcaggcagactttcgaaaaccaggtcaaccgc
atcctgaacgatgctcgtgacaagactggtgccagcgcccagaagtccctgtctgaattc
aacaacttcaaggccatggtggtctctggagccaagggctctaaaattaacatatctcag
gttattgcctgtgtgggtcagcaaaacgtggagggtaagcggatccctttcggcttccgc
aagcgcacgctgccccacttcatcaaggacgactacggtcccgagagtcgtggcttcgtc
gagaactcctacctggccggtctgactccctccgagtttttcttccacgccatgggagga
agagagggtctcattgatactgctgtcaaaactgccgaaacaggttacatccagcgtcgt
ctgatcaaagctatggagagcgtgatgatcgcctatgacggcacggtgcgaaacagcaac
ggccaggtgatccagctgcgttacggagaggatggcctcgacgggggcaccgtagaattc
cagagcatgcccaccctcaagccttccaacaaatcttttgagaagaagttccgcttcgac
acttgtaatgagcggtacctgcgtaaggtgttcactgaggacgtggtgcgtgaactcatg
ggcagcgccacagctgtctctgagctggagaaggagtgggaacggctcaggaaggaccgt
gaaatattgcgaaccatcttccctacaggtgacagcaaggttgtgctaccgtgcaacctc
cagaggatgctctggaatgctcagaagattttcagggtgaacctgcgagcgcccacagac
ttgtctcctctcagggtggtgcaaggtgtcgaggagctggtgaagaaactagtcattgtg
cccggtgaggaccacttgagtatccaggccaacgagaacgccacattcctgttccgtgca
ctgttgcgggccactctgtgctccaagcgcgtggccgaggagttccgactttccacggaa
tccttcgagtggctgctgggcgagattgagacccgcttccaccagtcacagggccagcct
ggtgagatggtgggtgccctggccgcccagtctctgggtgagccagctacccagatgacc
ctgaacactttccactacgccggtgtgtcggccaagaacgtcacactaggtgtgcctcgt
ctgaaagagatcatcaacatctccaaaaagccaaagacaccctcgctcactgtcttcctg
acgggtgccgctgcacgagatgccgagaaggccaaggacgtcttgtgccgattggagcac
acaaccctgcgcaaggtgactgccaacacagccatctactacgatcctgacccgcagaac
acggtcatctcggaggaccaggagtttgtgaacgtctactatgagatgcctgactttgac
cccactcgcatatcgccctggctgctccgtgtggagctagaccgcaagcgtatgacggac
aagaagctcaccatggagcagattgccgagaagattaacgctggttttggtgacgacctc
aactgcatcttcaatgatgacaacgccgagaagctggtccttcgtatacgaatcatgaac
agcgatgacggcaaattccaagatgaggaagaacaagtggacaagatggaggacgatgtg
ttccttcgttgcattgaagccaacatgctgagtgacatgactctgcaaggcatcgaagct
atcacaaaggtgtacatgcacctgcctaccacagacaacaagaagcgcattgtccttacc
gagactggagagtttaaggccattgccgaatggcttctggaaactgatggcaccagcctc
atgcgagtgctgagcgaacgggacgttgaccctgtccggacatactccaacgacatttgt
gagatcttcgctgtcctgggcattgaagccgtccgaaaggctgtggagaaggagatgaat
catgtcatctcgttcgacggttcgtatgtcaactaccgccacttggctctcctgtgcgat
gtgatgaccgctaagggacatctgatggccatcacacgtcacggaatcaaccgacaggac
acgggggccctcatgagatgttcctttgaagagaccgttgatgtgctcctggatgctgct
tcacatgctgaggttgacttcctgaaaggtgtctctgaaaacatcatcatgggacagctg
gcacgtatgggcacaggggcatttgacttgatgctggatgccgagaagtgcaagtacggc
attgagattcccatgaacctgcctggaatgatgggatccctctgtggccctggagtgttc
tttggtagtgcagccacaccaatggctgggatgtcccctcagatgacaccgtgggcgaca
ggtgccactccggcttacggcagtggctggtcacctaacgtgggaagtggcatgacacca
ggaggtgctggcttctcaccctctgcatcaagtgatgctagtggcttcagccctggtgcc
tgcagccctgcatggtcaccgcagccgggctcgccagcctcgtcacctgcatcaccttat
atacctagccccagctctccaaactactctccttcttcacctgcttatgcaccttcttcc
ccctctctcactcctgcctccccaacctactccccaacatctccgtcctactctcccact
tctccatcctattcgccaacgtcccccacatactcgcccacttctcccaactactctccc
acatcaccaagttattcaccaacatctccctcctactccccaacaagccccagctactcc
ccaacatcaccatcctactccccgacatcaccgtcctattctccaacaagcccgagctac
tcacccacttcgccgtcctactcgccaacttccccatcttactctcccacatctccttcc
tattccccgacttctccatcctactctccaaccagtcccagctattccccgagctctccc
aactacactcctgcatcaccttcctactcgccaacctcgccttcttactccccgacctca
ccgtcctattcacccacttctccatcctactccccaaccagcccatcctactcccctagc
tctcccaactattctcctcaaagtcctagctactcgcctggtagccccagctactctcca
agcagtccgaagtactctccaacctctccctcttactctccgacaagtcctagctattct
cctggctcgccccagtacacgccgtcatcccccaagtactctcccacctcgccaacgtat
tcgccaacgtctccatcgtattctccgtcaagtccgaagtattctccaacgagtccaaag
tactcaccgacaagccccacctacacgccttcgtctcctaagtatagcccgacctcacct
cagtacagtccaacgtcgccgcagtatagccccacgtcgccaaagtactctccgacgtca
cccaagtattctcccacgtcgccaacgtattctccgacatcaccgaagtattcgcctact
tcacctacttactctcccacaagtcccaagggatcaagctactccccaaccagtccgggc
tactccccatcctcaccgacttacagcccgacgagccctaacatagaagaggatagcgac
aatgactaa
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integrated database retrieval system
