Dermacentor albipictus (winter tick): 139059024
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Entry
139059024 CDS
T11267
Name
(RefSeq) collagen alpha-1(II) chain-like
KO
K19719
collagen type II alpha
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139059024
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dalb00536
]
139059024
Glycosaminoglycan binding proteins [BR:
dalb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139059024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139059024
NCBI-ProteinID:
XP_070392915
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All DBs
Position
4:complement(5357366..6648712)
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AA seq
1501 aa
AA seq
DB search
MATAGLTPLGLLLCVVAGTADAAAKPQVDYDYVIENNQTDDGSSTSCMFNGATYADGDEW
LPDPCTTCKCLLGNTVCDTEQCPRLECGDQYVPLGQCCPVCTGSGREVTVPVPEQPEYPE
PTHGAASPEPLPYPEYPVLTFPGPRGPPGDHGTPGRPGERGSPGEPGGHGFPGSPGPPGP
PADLSQWFHQLSLQQGPLGGDKGPAPDAFQFMQASVGPVGPRGIPGPQGPPGPQGFQGLR
GELGETGPQGPPGPQGERGLPGIPGKDGDGGEDGRPGAPGPPGPMGQRGLPGMPGLPGAK
GHRGFPGLDGAKGDQGLPGEKGSNGAPGRQGQPGPIGPAGPRGERGRDGPPGPPGIRGID
GLPGPPGSTGAVGRPGPPGFPGSPGIKGDTGGPGTKGSQGFQGARGEPGKPGIPGENGVP
GPPGKDGSPGEKGIQGDTGPPGQPGFPGSRGTPGLPGSSGLPGMKGAPGIPGSSGHKGEQ
GLKGDMGPMGPRGISGPPGPSGKRGKTGANGPQGAQGPPGERGPSGLRGLPGADGLGGPK
GLQGDRGPQGPQGPKGSTGDAGRPGVPGLQGVRGPPGLPGLQGKDGLPGERGLPGADGKP
GEQGIQGTQGLSGLPGLPGAKGDQGETGAEGRPGPQGSPGPRGDAGKEGPTGPTGIPGRP
GEAGERGLPGPMGPRGFQGLPGLAGSPGPDGKEGQPGTAGPPGPSGPHGERGERGFPGER
GRAGLPGPQGVRGEAGPPGHDGARGLPGEKGSKGHAGPPGLVGLPGRRGDTGQPGAKGTR
GEQGPPGAEGPPGRTGDQGPQGPVGSPGPHGEPGEKGEPGTTGATGVTGAPGLQGDRGLT
GQPGPPGFPGPTGAPGVAGAKGAIGAPGDKGQQGDAGSQGPPGETGQQGAQGLPGPKGPR
GETGPKGDAGFVGAPGRPGEAGRPGEPGNPGAQGPAGIPGIKGATGDTGRVGVPGPAGPP
GPLGFPGAKGEAGAEGLVGHPGSPGPQGPQGDRGLPGMPGLQGPAGQAGPRGQQGEKGQE
GKRGSDGQTGPQGPPGLQGPPGSTGEPGPMGQPGKEGASGLQGRPGDKGPVGPPGQPGPP
GIQGLQGPPGSPGPAGATGERGERGEAGPPGVRGPQGQRGPQGAPGPQGFKGDRGAAGER
GSKGHRGLVGLQGLTGSAGPPGAKGPIGNPGPPGAPGTPGPKGPAGRDGSQGPPGPMGAP
GPRGPQGEAGKPGSSGNPGPPGPPGRPGEPFGYDAAALHAIMGQGQVKGPDPLAGDEPAK
LFDAAVPLEEKQRIVFGYYRRLVDDYDRLRHPTGQKDAPARSCRDLVALHPDLPDGLYWI
DPNEGNARDAVQVQCRMATGASCVLPSPNQVPKKAHYVGRSKQVWFSEMEAGYQMSYKID
RVQLTFLQMLSSGAVQNITYQCRNSVAFWDTGKQSHRRALRLMAHNDLELRAPEPHGDTN
PAFTFTALFDGCKDRSDKWSYTLLQYKSEKPQRLPIVDVAPRDIGFKNQEFGLEIGPACF
Y
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccgggctcacgccgctcgggctgctgttgtgcgtcgtggccggcacggcg
gacgccgcggccaagccccaggtcgactatgactacgtcatcgagaacaaccagacggac
gacggcagcagcacttcgtgcatgttcaatggggctacctacgccgacggggatgaatgg
ctgcccgacccgtgcaccacatgcaagtgcctacttggcaacaccgtctgcgatacggag
cagtgcccgaggctcgagtgcggtgaccagtatgtacccttgggacagtgctgtcccgtc
tgcacaggaagtgggcgggaagtcacagtgccagtcccggagcaacctgagtatcctgaa
cctacgcacggagcggcatcccctgagccattaccatatcccgagtatccagtcctgacc
tttcccggaccaaggggcccacctggtgatcacggaacgcctggtcgtcccggagaacgt
ggctctcccggcgaacctggcgggcacggcttccctggcagccctgggcccccgggacca
ccggcagatctttcgcagtggtttcaccagctatctcttcaacaagggcctctcggtgga
gataaaggaccagctccggatgctttccagtttatgcaagcctctgtgggacctgtggga
ccgcgtggaataccagggcctcaaggacctccaggcccacaaggatttcaaggattgcgt
ggagaactaggcgaaacaggcccacagggtccaccagggcctcaaggtgaaagaggactc
ccaggaattccaggcaaagatggtgacgggggcgaagatggacggcccggagcacctggc
ccaccaggccctatgggtcaaagaggacttcctggcatgccgggacttcctggtgctaaa
ggtcacagggggtttccaggccttgacggtgctaaaggcgatcaaggtcttccaggtgaa
aaagggtcaaacggagcgccaggacgacaagggcaacctggacctatcgggccagccgga
ccaagaggggagcgaggcagagacgggcccccggggccaccgggaatacgaggaattgat
ggtctgcctgggccaccaggatcaacgggtgctgtcgggcgcccaggcccaccaggattc
ccggggtctccaggaataaagggtgacacaggcggcccaggaaccaaagggagccagggg
ttccagggagcacgtggcgagccggggaagccgggcattcctggagagaatggggtgccg
ggtccacctggcaaggatggatcgccaggagagaagggcattcagggtgacaccggacct
cctggacagcctggttttccaggatcccggggcacacctggcctacccggcagcagtgga
ctacctggaatgaagggggcaccgggcattcccggctcatcaggccacaaaggtgaacaa
ggcttaaaaggagacatggggcctatgggtccaaggggcatctccggacctccaggtccc
tctgggaaacggggcaagacaggtgcgaatggacctcaaggagcccaaggacctccagga
gaaaggggtccttcagggctgcgcggccttccgggagctgatgggctgggtggcccaaag
ggcctccaaggagaccggggtcctcaaggaccacaaggacccaaaggctccacaggtgac
gctggaaggccaggagtaccaggcctccagggggttcgaggccctcccggactaccaggc
ctgcagggtaaggacggactgcctggcgagaggggcttgcccggtgctgatggaaaacca
ggtgagcaaggtattcaaggcacacaaggcttgtcgggtttgccaggactaccaggcgcc
aaaggagatcagggcgagaccggcgccgaaggccgtccaggtccacaaggcagcccagga
ccacgtggggatgcgggtaaggaagggcccactggacccaccggaatccccggccggcca
ggggaggccggagagcgtggtctaccaggacccatgggcccaagaggcttccagggtctg
ccgggcctcgctggcagccctggcccagatggcaaggagggccagccgggcacagctggg
ccaccgggaccatctggcccccacggcgagcgtggagagagaggatttcctggcgagagg
ggccgagctggacttccagggccacagggtgtgcgtggcgaggctggaccaccgggtcat
gacggtgcccggggccttcccggagaaaaaggatcgaagggacacgctggaccaccggga
cttgtgggtctcccaggccgacgtggtgacactggccaaccaggtgccaagggtacgcgg
ggtgaacaaggccctccgggtgccgaaggaccaccaggccgaacaggggaccagggtcct
cagggacctgtgggatctcctggaccacacggagagcccggagaaaagggtgagcctgga
accacaggcgcgactggtgtaaccggagctccaggtttgcaaggagacaggggcctgacg
ggacagccagggccgccgggatttcctggtcctacgggtgctcctggcgtggcaggtgct
aagggcgcgattggagcaccaggtgacaaaggacaacaaggagacgccggatcgcagggg
ccaccaggcgagacaggacaacagggagcgcagggacttcctggacctaaaggaccacgc
ggagagactggccccaagggtgatgcgggtttcgtaggagcacctggccgacctggtgag
gctggcaggccgggtgagccaggaaacccaggcgcacaaggaccagctggaataccaggc
atcaagggcgctaccggtgacactggcagggtcggagttccggggccagctggccctccc
ggacctcttggtttccctggcgccaagggtgaagctggggctgaaggtctagtgggccat
ccagggagccccggaccacaaggcccacagggagaccgtggtctgcctggaatgccagga
ctgcaaggacccgcgggacaagccggaccacgtggccaacaaggtgaaaaaggccaggaa
ggaaaaaggggcagtgatggccaaacgggtcctcaggggcctcccggactccagggccca
ccaggaagtacaggagagccgggacctatgggccagccaggcaaggaaggtgcttccggc
ctccaaggacggcctggtgacaagggacctgttgggccgccgggacagccagggccaccg
ggcatccaaggcttgcagggtccaccgggcagtccaggccctgcgggtgcaactggagaa
cgtggcgaacgtggtgaagccggccctcctggtgttcgcggcccacagggccagagaggg
ccacagggggcgcctggcccacagggtttcaagggcgatcgcggcgctgctggagaaagg
ggctccaaaggccaccgagggctagtaggactccagggcctcacaggatcagccggacca
cctggtgccaagggaccaataggaaaccccgggcctcctggagcaccgggtactcccggg
ccaaaaggaccagcgggacgagacggatcgcagggaccgccaggccctatgggcgccccg
ggtccacgagggccccagggagaagccgggaagcccggatcatccggaaacccgggacca
cccggacctccgggacggcctggagagcccttcggctatgacgctgcagcgctgcatgcc
attatggggcagggccaggtgaaaggaccggatccactcgccggggacgagccagctaag
ttgttcgacgccgctgttccactcgaggagaagcagcgcatcgtgtttggatactaccga
cgactggtggacgactacgacaggcttcgccacccgacgggccagaaagacgcacctgcc
cggagctgccgggacttggtcgccttgcacccagatctaccagacggcctctactggata
gatccgaacgaagggaacgccagggacgcagttcaggtccagtgccgcatggccacgggc
gcatcctgcgtgctgccttcgcctaaccaggttccaaagaaagcccattacgtggggcgc
agcaaacaggtttggttcagcgaaatggaagctggatatcagatgagctacaagatagac
cgcgtccagctgacttttcttcaaatgctgagttctggggccgtgcagaacatcacatac
caatgtcgcaattccgtggccttctgggataccggcaagcaatcgcaccggcgcgccctc
cgcctaatggcgcacaacgacctcgaactgcgggcgccggagccccacggagacacaaac
ccggcattcaccttcacggcgttattcgatggttgcaaggatcgttctgacaagtggagc
tacaccctgctgcagtacaagtccgagaagccacagcgcctcccaattgtagacgttgct
cctagggacattggattcaagaatcaggagtttggactagaaatcggaccagcctgcttc
tactag
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integrated database retrieval system
