Desulfosarcina alkanivorans: DSCA_04710
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Entry
DSCA_04710 CDS
T06544
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
dalk
Desulfosarcina alkanivorans
Pathway
dalk00540
Lipopolysaccharide biosynthesis
dalk01100
Metabolic pathways
dalk01250
Biosynthesis of nucleotide sugars
Module
dalk_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DSCA_04710 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dalk01005
]
DSCA_04710 (kdsA)
Enzymes [BR:
dalk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
DSCA_04710 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
dalk01005
]
Lipid A
DSCA_04710 (kdsA)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
DUF5091
Motif
Other DBs
NCBI-ProteinID:
BBO66541
UniProt:
A0A5K7YIG3
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All DBs
Position
complement(505443..506231)
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AA seq
262 aa
AA seq
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MKPDSSFFLVSGPCVIEDEAVTLRIAERLKSITDSLGIDFTFKASYDKANRTAITSFRGP
GITDGLRVLAKVKETLGVPVLSDVHRINEVEAAAQVLDVIQIPAFLCRQTDLILAVAKTG
KPVNVKKGQFLAPWDMANIIEKIRSVSGVRPMITERGVMFGYNNLVVDFRGIQIMQQTGC
PVVFDATHSVQLPGGAGTRSGGQREFAPVLARAAIAAGADGVFLEVHEDPDNALCDGPNS
LRLDQLPDLLAQLKAIKAALAT
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgacagctcctttttcctggtcagcggcccttgcgttatcgaggacgaggcc
gtcacccttcgaatcgccgaacgccttaaatccatcacggacagcctcggcattgacttc
actttcaaggcgtcctacgacaaggccaaccgaacggccatcacatcattcagggggccg
ggcataaccgacggcttgcgcgtgctggccaaagtcaaagagacgctgggtgtcccggtc
ctgtcggatgtccaccggatcaacgaagtcgaggcggcggcccaggtccttgatgtcatc
cagattccggcatttctctgccgccagaccgacctgatccttgccgtggcaaaaaccggc
aaaccggtgaatgtgaaaaaaggccagttcctggccccgtgggacatggccaacatcatc
gaaaaaattcgttcggtgtccggggtccggcccatgatcaccgaacgcggtgtcatgttc
ggatacaacaatctggtggttgacttcaggggcatccagatcatgcagcagacggggtgt
ccggtcgtctttgacgccacccacagtgtacagttgcccggcggtgcgggaacccgttcc
ggcggccagcgcgagtttgccccggtcctggcaagagcagccattgcggccggcgccgac
ggcgttttcctggaagttcacgaagatccggacaacgccctttgcgacgggcccaactca
ctccgattagaccaactgcccgacctgctggcacagttgaaggccattaaagccgcccta
gcaacttga
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