Desulfosarcina alkanivorans: DSCA_05280
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Entry
DSCA_05280 CDS
T06544
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
dalk
Desulfosarcina alkanivorans
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_2
AAA
HTH_29
HTH_28
HTH_30
nSTAND3
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
BBO66598
UniProt:
A0A5K7YBR5
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Position
complement(569567..570991)
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AA seq
474 aa
AA seq
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MSTIMIIDDDDQLRISFERLLKEEGYGVRTAPSGESGIRMITEAIPDLVLLDVRLPGMNG
LEAYRQIHRIEPKLPVIIMTAFGTTETAIEATKMGAFDYVIKPFDIPQILSTIRQALEAG
RFMRSPVDMDASPDKIKGEVIIGKSPAMQEVYKAIGRVSATDATVLVRGESGSGKELVAR
ALYHHSVRSDKPFLVINCVAIPDTLLESELFGYEKGAFTGATHRRVGKIEQATGGTVFLD
EIGDMPLNLQAKMLRLLQEKSIERLGGRETIPVDVRIIAATNRNLERLIADGQFREDLYY
RLKVITIWLPPLRERTGDIPLLADYFLSRYASELGIENPGITREAMSMLVSSPWPGNIRE
LSNTLQKALIFNRGAPLSLADITQATVDDAKNHHLSEDACDDQVRAWIRTLLSKGEQENL
FENCMDHFGGVLVGEALNLTGGNRSQAARLLGMSRPTLHAKIDKYQLKIETSVR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactataatgattatcgatgatgacgaccagctgcgcatcagtttcgagcgcctg
ctgaaagaggaagggtacggggtccgcaccgccccatcgggagaatcgggcattcgcatg
atcaccgaggcgattcccgatctggtgctgctggacgttcgcctgccggggatgaacggc
ctggaagcctacagacagattcaccgcatcgaacccaaactgccggtgatcatcatgacc
gccttcggcaccacagagacggccatcgaagccaccaagatgggcgccttcgactatgtc
atcaaaccctttgacatcccccagatactgtccaccattcgccaggccctggaggccggc
cggttcatgcggtcacccgtggacatggacgcatctccggataagatcaagggagaggtc
attatcggcaaaagtccggccatgcaggaagtatacaaggccatcggccgggtatcggcc
accgacgccaccgtgctggtccggggggaatcgggttcaggcaaggaactcgtggcgcgg
gccctgtaccaccacagcgtccgctcggacaagcccttcctggtgatcaactgcgtggcc
atccccgacaccctcctggaaagcgaactgttcggttatgaaaaaggcgccttcaccggt
gccacccaccgccgggtgggcaagatcgagcaggccaccggagggacggtattcctggac
gaaatcggcgatatgcccttgaacctgcaggccaaaatgctgcgcctcctccaggaaaaa
agcatcgaacggctgggcggccgtgaaaccattcccgtggatgtgcgcatcatcgcggcg
accaaccgcaacctggaacggctgatcgccgacggccagttccgggaggatctctactac
cgcctcaaggtcatcaccatctggctgcctccgctgcgtgaacgtaccggtgacatcccc
ctgctggcggactacttcctgagccgctatgcctcggaactgggcatcgagaaccccgga
atcacccgggaggccatgtccatgctggtctccagcccctggccgggcaatatccgggaa
ttgtccaacacccttcaaaaagcgctgattttcaaccggggcgccccgttgagcctggcc
gacattacccaggcaaccgtcgatgacgccaaaaaccatcatctcagcgaggatgcctgc
gacgaccaggttcgtgcctggattcgcaccctgttgtccaaaggggagcaggaaaacctg
ttcgagaactgcatggatcatttcggcggggtactggtgggggaagcgttgaacctgacc
ggcgggaaccggtcccaggcggcccggctgctgggcatgtccagacccaccctgcatgcc
aagatagacaagtaccagctgaagatagaaaccagcgtcaggtag
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