Desulfosarcina alkanivorans: DSCA_09310
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Entry
DSCA_09310 CDS
T06544
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
dalk
Desulfosarcina alkanivorans
Pathway
dalk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSCA_09310 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dalk03400
]
DSCA_09310 (uvrB)
DNA repair and recombination proteins [BR:
dalk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSCA_09310 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSCA_09310 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
SWI2_SNF2
Kinesin
AAA_16
Microtub_bd
DUF7623
Motif
Other DBs
NCBI-ProteinID:
BBO67001
UniProt:
A0A5K7YJP5
LinkDB
All DBs
Position
1033735..1035729
Genome browser
AA seq
664 aa
AA seq
DB search
MSSFKLVSEHTPCGDQPQAIDTIAARIQEGARSQVLLGVTGSGKTFTMANIIARVNRPAL
ILAPNKTLAAQLYNEFRQLFPDNAVEYFVSYYDYYQPEAYLPTTDTYIQKDSSINELIDK
MRHSATRNVLSRTDVVVVASVSCIFGLGAPEDYLSMRIDIEAGMDLPRERLLYQLVSIHY
QRNDMDFHRGVFRVRGDRVEIFPAYEEDKAIRIDYFGDEIENIFEFDPLKGTTMGHLDKV
TLFPASHYVTRRATLERATRTIVEELKGRVDFFRDENKLIEAQRIEERTRFDLEMIQEIG
YCNGIENYSRHLTGRLPGQPPPTLLDYFPKDFLVFVDESHIAVSQIRAMYKGDRSRKTTL
VNYGFRLPSALDNRPLKFDEWSRRIHQIVYVSATPADYELAAAEGQVVEQIVRPTGLIDP
KIHVRPARHQVDDLYGEIRDRQQRGERILVTTLTKRMAEDLTEYYTDLGLAVRYLHSDIS
TMERMDIIRDLRVGKFDALIGINLLREGLDIPEVSLAAILDADKEGFLRSARSLIQTCGR
AARNVNGTVILYADRITASMRQAIEETSRRRTIQQRYNRKHHITPKTVHKAITDIFDMAY
EPAETEPAQVAEAPAAYGPVDNIESAILDLEAQMQAAAKELAFEQAARIRDRIKALRKRM
LFES
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgtttaagctggtttccgaacatacgccctgcggcgatcaaccccaagccatc
gataccattgcggccaggatccaggaaggcgcccggagccaggtactgctgggggtcacc
ggttccggcaaaaccttcaccatggccaacatcatcgcccgggtcaaccggccggcgctg
atcctggcgcccaacaaaaccctggccgcccaactctacaacgaattccgccagctcttt
ccagacaatgcggtcgaatattttgtcagctactacgactactaccagcccgaagcctac
ctgccgaccaccgacacgtatatccagaaagactcgtccatcaatgagttgatcgataaa
atgcgtcattctgccacgcgcaatgtgctgtcgcgaaccgacgtggtggtcgtggccagc
gtgtcgtgcattttcggcctgggggcgccggaagattacctttccatgcgcatcgacatc
gaggccggcatggatctgccgcgggaacgattgctctaccagctggtgtcgatccattac
cagcgaaacgatatggatttccaccgcggggttttccgggtgcgtggcgaccgcgttgaa
atctttcccgcctacgaggaggacaaggcgatccggatcgattattttggtgatgagatc
gagaatatcttcgaattcgatccgctcaaagggaccacgatgggacacctggacaaggtg
accctgttcccggccagccactacgtcacccgccgggcgaccctggagcgcgccacccgg
accatcgtcgaggaactcaagggccgtgtcgatttctttcgcgatgaaaacaaactgatc
gaagcccagcgcattgaagaacgcacccgcttcgatctggaaatgattcaggagatcggc
tactgcaacggtattgagaactattcccggcatctgaccggacgcttgcctggccagccg
ccgccgacactgctggattatttccccaaggattttctcgtcttcgtggatgagagtcat
atcgccgtatctcagattcgggccatgtacaaaggggaccggtcccgcaagacaaccctg
gtcaactatggattccggttgccgtcggccctggacaaccggccgctgaaattcgacgaa
tggtcccggcgaatccaccagatcgtctatgtgtcggccacaccggctgactatgaactg
gcggccgccgaaggacaggtggtggagcagatcgttcggcccaccggtctcatcgacccg
aaaatacatgtgcgccctgcgcgtcaccaggtggatgacctgtatggggagattcgtgac
cggcagcagcgcggggaacggattctggtgaccaccctgaccaaacggatggccgaagac
ctcaccgagtattatacggatctggggctggccgtgcgatacctgcattccgatatttcc
accatggaacgcatggacattatccgggacctgcgggtgggcaaattcgacgccctgatc
ggcatcaatctgctgcgcgaagggctggatattcccgaggtgtccctggcggcgatcctc
gatgcggacaaggaaggctttctgaggtccgcgcgctctctgatccagacgtgcggccgt
gcagccagaaacgtcaacggcacggtcatcctttatgccgaccggataaccgcttccatg
cggcaggccatcgaagaaaccagccggcggcggaccattcagcagcggtataatcgaaaa
caccacatcaccccgaaaaccgtccataaagccatcacggacattttcgacatggcctac
gaaccggccgagaccgaaccggcacaggtcgccgaagcgccggctgcctatggccccgtc
gacaatatcgagtccgcgattcttgatctggaagcacaaatgcaggcggcggccaaggaa
ctggcctttgaacaggcggcccggatccgggaccggatcaaggcgctgaggaaacggatg
ttgtttgagtcgtaa
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