Desulfosarcina alkanivorans: DSCA_09520
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Entry
DSCA_09520 CDS
T06544
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
dalk
Desulfosarcina alkanivorans
Pathway
dalk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DSCA_09520 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dalk03400
]
DSCA_09520 (xseB)
Enzymes [BR:
dalk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DSCA_09520 (xseB)
DNA repair and recombination proteins [BR:
dalk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DSCA_09520 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
RACo_linker
DUF5830
DUF1657
Motif
Other DBs
NCBI-ProteinID:
BBO67022
UniProt:
A0A5K7YC79
LinkDB
All DBs
Position
complement(1060903..1061139)
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AA seq
78 aa
AA seq
DB search
MSPKAKPSFEKSIKDLEKIVKALESGDLPLEKALEKFEAGIKLSRYCAETLDEAEKRVTV
LMADDSGQPEEQPFAPRD
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccaaggcaaaaccgagtttcgaaaaatcgatcaaagacctggaaaaaatcgtc
aaggcgctcgaatccggggacctgccattggaaaaagcccttgaaaaattcgaagccggt
atcaagctgtcccggtattgcgcggagacgctggatgaagccgaaaagcgggtaacggtg
ctgatggctgacgattcgggccagcccgaagaacaaccgtttgccccccgggattag
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