KEGG   Desulfosarcina alkanivorans: DSCA_10690
Entry
DSCA_10690        CDS       T06544                                 
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
dalk  Desulfosarcina alkanivorans
Pathway
dalk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dalk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    DSCA_10690 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dalk03400]
    DSCA_10690 (recB)
Enzymes [BR:dalk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     DSCA_10690 (recB)
DNA repair and recombination proteins [BR:dalk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DSCA_10690 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 AAA_22 DUF87 AAA_11 ResIII NPHP3_N
Other DBs
NCBI-ProteinID: BBO67139
UniProt: A0A5K7YH31
LinkDB
Position
complement(1184933..1188586)
AA seq 1217 aa
MTDSLSPAFHPIEDINRLDLSRHALVEASAGTGKTYTIENLVVRLLKEDPDVGLENILLV
TFTEKATSELKVRIRQKIEQSLDHDPDLTDMARQKLGESLDGFDNAAIYTIHGFCHTLLK
EFPFETGSLFVQEVVDDAPLLGKLLHEAMRSDWPHRYGHRLETLLALSNYSAGADAFVET
ATALAQRLSGDPSREEVIPDPATLDVDSLWQAAERTILALKDLVGTPPRLADGYGRLNIN
KRSRAAILRDMVVPLEQALETVGPGTCRLVEFQAVVAAFGARHSSGRRNIDRLVPEKWLK
AGDNLHECPHLAAIRDRLDTLIRLFSDLSHVLMLNSVDRLQKDARETKTRNGWLSYQDML
SRVADFLDGAGADDGIRKIRNRYRVAFVDEFQDTDDVQWRIFSRLFLHDGHDAPDNRLFL
IGDPKQAIYAFRGADVFTYLEARQRMANLAGKGRANLYDLRVNWRSTPELVDVFNRMFGQ
ADWFGTRENRGPFDIGYAPSASPDSQPGPCETGCDRSKRPPFNIIDLTSAKSHASAKRLL
AETICREIRYLVGQGGIRIADGEGRDRALHFGDIAILVRSQSEFALIEPLLVESSIPFAY
YRKPGLFQCRQAHWLSMVLRAVWTPQHAATVRMALLTPFFDMSPAGLGAWRELPAAHASL
RLLERWHADARDRRWGPLFQSVMEDSGLTLRHCTDAGWERTETNLQQLFDFLEEAAYSRN
LDGGGLVALLDSLRLTGVGAGPDADIHQIEDEGDKVQILTMHVSKGLEFPVVFIAGGLTV
RNDSGLQVYHALDAGRPERVCRRVIDLTAATGREQAEKENIDENKRLYYVAFTRARLKLY
IPYFPDGRNYGWLGPVCRFVSTSVEQAFKNASGALPSGAWHDAGSTAPSPHERTRRGDDG
TKARLNLPTGALLPGTNDFRGRKVSLESFSSIGRWIRRSPVGHDHQPASFRLVDGMGHED
DEPAAAPSTGPADPDVSDGLPGGARMGSMFHHIFENIDFQTVVAGPTDILAHDASRNIIR
SAMALYRIEPLWTAPIARMVAATLRMPIDLDGRSLVLGRLTPSRRRHEMEFYFPLATSEP
GGTPVPGCTLSAGRCREMMIRGFVDLVFRWQGRYCIADWKSNRLSGGYGQDDMAGEMAAA
GYDLQYQLYTVAVLRWLKHQLGDRFDPHRHFGGVFYLFIRGMGAGGADGVFHVPPEQLLP
LERLQEIINQQIAGIQW
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgacggactcactgtctccggcatttcatccgatcgaggacatcaatcggctggatctt
tcccggcacgccctggtggaggcatctgccgggacgggaaagacctataccatcgagaac
ctggtggtccgcctgttgaaagaagaccccgacgtcggactggagaatattctgctggtg
acttttaccgaaaaagccaccagcgaactgaaagtgcgcattcgccagaaaatcgagcag
agtctggaccatgatccggacctgaccgatatggcccggcaaaagctgggggagagcctg
gatgggtttgacaatgccgccatctataccatccacggtttctgtcacaccctgttgaag
gaatttccttttgaaaccggaagcctgttcgtgcaggaggtggtcgacgacgcccccctg
ctggggaagctcctgcacgaagcgatgcgatcggattggccgcatcgatacggccaccgc
ctggaaacgctgctggccctttccaactattcagcaggtgccgacgcgtttgtggaaacc
gccaccgcattggcgcagcggctgtccggtgatccctcccgcgaagaggtgattcccgat
ccggccacactggatgtggacagcctgtggcaggcggctgaaaggacgatactggcgctc
aaagacctggtggggacgccgccccggctggctgacggatacggacggctcaacatcaac
aaacggtcccgggccgctatccttcgcgatatggtggtgcccctcgaacaggcgctggaa
accgttggacccggcacctgccggctcgttgagttccaggcggtggtcgccgcctttggg
gcgcgccattcatccggcagacgcaacatcgaccggctggtccctgaaaaatggttgaag
gccggggacaacctgcatgaatgcccccacctggcggccatccgtgatcggctcgacacc
ttgatccggctgttcagcgacctttcccacgtgttgatgctgaattccgtggaccgattg
caaaaggacgccagagaaaccaaaacgcgaaacgggtggctcagctatcaggacatgctc
agccgggtggctgatttcctggacggcgccggtgcggacgacggcatccggaaaattcgc
aaccgctaccgggtcgctttcgtggatgagttccaggataccgacgatgtgcaatggcga
atcttcagccgtcttttcctgcatgatggccacgatgcgccggacaatcggctgtttttg
atcggtgaccccaaacaggccatttacgcttttcgcggcgccgacgtattcacctacctg
gaagcccgacagcggatggccaacctggccggcaagggccgggccaacctgtatgacctg
agggtgaactggcgcagcaccccggaactggtggacgtcttcaaccggatgtttggccag
gcagactggtttggcacccgggaaaaccggggccctttcgacatcggatacgcaccgtcc
gcttccccggattcgcaaccggggccctgcgagaccggctgcgaccggtcgaagcgcccg
ccgttcaatatcatcgacctgacctcggccaaaagccatgcgagcgccaagcgcctgctg
gctgaaaccatttgccgggagatccgctatctggtggggcaggggggcatccgcattgcc
gacggcgaggggcgcgaccgggcgctgcatttcggcgatattgcgatcctggtgagaagc
cagtcggaatttgccctgatcgaaccattgcttgttgaatcgtcgatcccctttgcctat
taccgtaagcccggcctgtttcaatgccgccaggcccattggctcagcatggtgctccgt
gcggtctggacgccccaacatgccgccacggttcggatggccctgctgactccttttttc
gacatgtctccggcgggcctgggagcatggcgcgaactgccggcggcgcatgccagtctg
cgactgctggagcgctggcacgccgatgcacgggacagacgctgggggccgcttttccag
tcggtgatggaagactccggcctgacactgcgtcactgcacggatgccggctgggagcgc
accgaaaccaatcttcagcagctgttcgattttctggaagaggcggcgtattcccggaac
ctggacgggggcggcttggtggccctgctggacagccttcgcctgaccggcgtcggcgcc
ggacccgacgccgacatacaccagatcgaagacgagggcgacaaagtccagattctgacc
atgcatgtcagcaaggggctggaattcccggtggtttttatcgccggcggattgaccgta
cgcaatgacagcggattgcaggtatatcacgccctggatgccgggcgccccgagagggtg
tgccggcgggtgatcgacctgacggcggccaccggccgggagcaggcggaaaaagagaat
attgatgaaaataaacgcctatattatgtggcatttacacgagcacggctaaagctttac
attccttattttcccgacggccgaaactatggatggctggggccggtttgccggttcgtc
tcaaccagtgtcgaacaggcatttaaaaatgcctccggtgcgctgccctccggtgcgtgg
cacgacgccggcagcacggccccgtcgccccatgagcggacgcgccgcggggacgacgga
accaaggcccgactgaatttgccgaccggcgcactgctgcccggtacgaacgatttccgg
ggccggaaagtctccctggaatccttttccagtatcggccggtggattcgccggtcgcct
gtcggccatgaccaccagccggcttccttccgcctcgttgacgggatggggcacgaggac
gacgaacccgctgcagccccatcgaccggaccggcggacccggacgtgtccgacgggctt
cccgggggcgcgcgcatggggtccatgtttcaccatatttttgaaaacatcgattttcag
accgtggtggcggggcccacggacattctggctcacgatgcttcccgaaacatcattcga
tcggccatggcgctctaccggatcgaaccgctctggacggcgccgatcgcacggatggtc
gccgccaccctgcgcatgcccattgacctggatggccgttccctggtccttggacgcctg
accccgtcccggcggaggcacgaaatggaattctattttcccctggcgacatcggagccc
ggtgggacgccggtacccgggtgcaccctgtcggccggccgctgccgggagatgatgatc
cgtgggtttgtcgatctggtttttagatggcagggccggtattgtatcgctgactggaaa
tccaaccggctgtcgggaggatatggacaggacgacatggccggagagatggccgcagcc
ggctacgacctccagtaccagttgtacaccgtcgctgttctgagatggctcaagcaccag
cttggggaccgttttgacccccatcgccatttcggcggggtattttacctctttatccgg
ggcatgggggcagggggggcagatggtgtctttcatgttcctccggaacaactgctgcct
ctggaacgcctccaggaaatcataaaccaacagatcgcggggattcaatggtga

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