Desulfosarcina alkanivorans: DSCA_11000
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Entry
DSCA_11000 CDS
T06544
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dalk03021
]
DSCA_11000
Transcription machinery [BR:
dalk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSCA_11000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r3
UPF0122
KORA
Motif
Other DBs
NCBI-ProteinID:
BBO67170
UniProt:
A0A5K7YGF1
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All DBs
Position
complement(1223354..1224298)
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AA seq
314 aa
AA seq
DB search
MKKKKVKPAAAPRKKPAPRASGRTSDKAVVKYDPLQRYLSEISRYNLLTREEEVSLGKRV
QEQGDQDAAYRLVTSNLRLVVKIALEFQRVWMQNLLDLIQEGNIGLMQAVKKFDPYKNVK
FSYYASFWIKAYILKFIMDNWRLVKIGTTQGQRKLFFKLKKEKQKLIDEGFDPKPKLLSQ
RLGVSEREIVDMDQRLDGWDISLDAPLKEDSDTERIEFMSTESESAEETVAKKEMSSLLN
QKISEFRTQMTDRELEIFDKRIFSDTPVTLQEIGDKYGISRERVRQVEKNVVKKMRDYFK
KEIPDFETYTEGVS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaaaaagttaaaccagcggcagcacccaggaaaaaacccgccccgcgggca
agcgggcggaccagtgacaaagccgttgtcaaatacgatccgcttcagcgctatctttcc
gagatcagcaggtacaatctgttgacccgggaggaagaggtttccctggggaagcgggtt
caggagcagggagatcaggacgcagcctaccgcctggtgacgtccaaccttcggttggtg
gtaaaaatcgcactggaatttcaacgggtatggatgcagaacctgctggacctgattcag
gagggcaacatcggcctgatgcaggccgtgaaaaagtttgatccctataagaatgtcaag
ttttcctattatgcttccttctggatcaaagcctatattctgaagttcatcatggacaac
tggcggctggtcaaaatcggcaccactcaggggcagcgcaaactctttttcaagttgaaa
aaagaaaagcagaaactgatcgatgaagggtttgaccccaaacccaaactgctttcccag
cggttgggcgtttccgaacgagaaattgtggacatggatcaacgactggacgggtgggat
atctctctggatgcgccgctgaaagaagattctgacacggagcggatcgaatttatgagc
accgaatcagaatcggccgaagaaaccgtggccaaaaaagagatgtcgtctctgctcaac
cagaaaatttccgaattcaggacccagatgaccgaccgggaattggagatattcgacaaa
cggattttttccgacacgccggttacccttcaggagattggcgataaatacggcatatcc
cgtgaaagggtgcggcaggtcgaaaaaaatgtggtcaaaaagatgagggattatttcaaa
aaggaaattcccgactttgaaacctacacggaaggtgtttcctga
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