KEGG   Desulfosarcina alkanivorans: DSCA_12330
Entry
DSCA_12330        CDS       T06544                                 
Symbol
vapC
Name
(GenBank) ribonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
dalk  Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:dalk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dalk03016]
    DSCA_12330 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dalk02048]
    DSCA_12330 (vapC)
Transfer RNA biogenesis [BR:dalk03016]
 Prokaryotic type
  tRNA degradation factors
   DSCA_12330 (vapC)
Prokaryotic defense system [BR:dalk02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    DSCA_12330 (vapC)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: BBO67303
UniProt: A0A5K7YFF1
LinkDB
Position
complement(1381901..1382308)
AA seq 135 aa
MTVMLDTDICIYTIKRKPISVLKRLEKVQPGMVVMSVITFAELINGAKKSQHVEANLRRL
NALSELIDVLPFDKDAAMAYGDVRSDLEKRGLIIGGNDLFIAAHALSLNLTLVTNNQREF
GRVNGLKIENWVENE
NT seq 408 nt   +upstreamnt  +downstreamnt
atgacggtcatgctggacacggatatttgcatttacacgattaaacgcaaaccaatctct
gtcttgaaacgactcgaaaaggtccagcccggcatggttgttatgtccgtcatcactttt
gccgaattaatcaacggggccaaaaaaagccagcatgtagaagcaaacctcaggcggtta
aacgcattgagtgagcttatcgacgtcttaccttttgataaggatgctgccatggcatac
ggtgatgtccgttctgacttggaaaaaagaggcctgatcattggaggcaatgacctgttt
atcgctgcccatgccctgagcctgaacctgacattggttaccaacaatcaaagggaattc
ggccgggtgaatggattaaagattgaaaattgggtcgagaatgagtaa

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