Desulfosarcina alkanivorans: DSCA_13180
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Entry
DSCA_13180 CDS
T06544
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
dalk
Desulfosarcina alkanivorans
Pathway
dalk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DSCA_13180
09124 Replication and repair
03420 Nucleotide excision repair
DSCA_13180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dalk03021
]
DSCA_13180
03036 Chromosome and associated proteins [BR:
dalk03036
]
DSCA_13180
03400 DNA repair and recombination proteins [BR:
dalk03400
]
DSCA_13180
Enzymes [BR:
dalk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DSCA_13180
Transcription machinery [BR:
dalk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DSCA_13180
Chromosome and associated proteins [BR:
dalk03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DSCA_13180
DNA repair and recombination proteins [BR:
dalk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DSCA_13180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
PDDEXK_1
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
BBO67388
UniProt:
A0A5K7YE90
LinkDB
All DBs
Position
complement(1479207..1481546)
Genome browser
AA seq
779 aa
AA seq
DB search
MKERHKIAVRTLVDVVLRAGDLDMRFAAPGRPLEGIRAHQKIQRQRPEGYRAEVPVSLDV
ETADLILEVGGRIDGVLDNEGGTIVEEIKSTTRDLESIEKATDPCHWGQVKVYAYLLAKE
QGIPAVTTRLTYYHLDSGDTLELVERMTADRLESFFQQLVDRYLKWAVTLARWRQLRDAG
ILALDFPFPAYRTGQRPMAVAVYRAIRDGGQALIQASTGIGKTMAALFPAIKTMGEGHID
RIFFLTARNTGKASALKALSILQERGLRLKRVSLTAKDRICFCPDATCNPDVCAYARGHF
DRLQAAMDDAFVLDNLDRDAIETVARSHWVCPFEFSLELSRWADCIVCDYNYAFDPRVYL
KRFFDEEHGAYAFLVDEAHNLVDRSREMFSARLRKSEFLELRRAVKSHLPAVYRAAGKIN
TWMRHAGKGAREAGGFQSEARLPDGLEPLLRAFLRVSERWLARNQPASYRDIVMDRYFGT
SGFLRVWDQYDDSYVTCRQVAGRDLQVKLFCLDPSGHLKRALKRSRATIFFSATLMPATY
FQDLFGCEPTAVRLAVPSPFPRRHLEVLIATGISTYYAQREQSVDRIRALVRTFIRSRKG
NYLCFFPSYEYMNMVAGQFEGTEDGVQVLVQDREMDDAGRARFLERFSAENDRTLVGFAV
MGGIFGEGIDLVGDRLSGAVIVGVGLPAICPERDLIRRYFDGQGAGFDFAYRYPGINRVL
QAAGRVIRTHTDRGAILLVDRRFFSPGYQQLLPVHWSAAVVRSERQLAARLHRFWSSAV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagagcggcataaaatcgctgtcagaaccctggtggacgttgtactgcgagccggc
gacctggatatgcgttttgccgctcccgggcgccccctcgagggcattcgcgcccaccag
aaaattcagcgccagcggcccgaggggtatcgtgccgaggtgccggtttcattggatgtt
gaaacggcggatctgatcctggaggtcggcggccgcatcgatggtgttctcgacaatgag
ggcggcaccatcgtcgaggagatcaaatccaccacccgggacctggaatccatcgaaaag
gccaccgatccctgccattggggccaggtcaaggtctacgcctacctgctggcaaaggag
caggggataccggccgtgaccacgcgactgacttattatcacctggacagcggcgacacc
ctggaactggtcgagcggatgaccgctgaccggctggaatctttttttcaacagctggtc
gaccgctatctgaagtgggccgtgaccctcgcccggtggcgtcaactcagggatgccggc
atccttgccctggattttccctttcccgcttatcgaaccggccagcggcccatggcggtg
gccgtttaccgggccatccgcgacggcggccaggcgctcatccaggcttccaccggaatc
ggcaagaccatggccgcgctgtttccggcgatcaagaccatgggggagggccacatcgat
cggattttttttctcaccgcccgcaacaccggcaaggcttccgccctcaaggccctgtct
attctccaggaaagggggcttcgattgaaaagggtctccctgaccgccaaggaccgaatc
tgtttttgtcccgatgccacctgcaacccggatgtgtgcgcctatgcgcgcgggcatttc
gatcggctgcaggccgccatggatgacgcctttgtcctggacaatctggaccgcgatgcc
atcgagaccgtggcccggtcccattgggtctgtcctttcgaattctccctggagctttcc
cggtgggcggattgcattgtctgcgactataactacgccttcgacccccgtgtttacctg
aagcggttcttcgatgaggaacacggcgcgtatgcctttctggtggacgaggcgcacaac
ctggtggatcgctcccgtgagatgttttccgcccgattgagaaaatccgaattcctcgag
ctccggcgggcggtgaaatctcacctgccggcggtgtatcgggcggcgggaaagatcaac
acctggatgcgccatgccggaaaaggcgcgcgggaagccggtggctttcaatccgaggcc
cggcttcccgatggcctggaacccctgctgcgagcctttttacgcgtatcggaacgctgg
ctggccaggaatcagccggcctcgtatcgggacatcgtcatggaccgttatttcgggacc
agtggatttttgcgggtatgggatcagtatgatgacagctacgtcacctgccgacaggtg
gcgggcagggacctgcaggtcaagttgttctgcctggacccttccgggcacttgaaacgg
gcattgaaacgctcccgggcgaccattttcttttccgccaccctgatgccggcaacctat
tttcaggacctgttcggatgcgagccgaccgctgtcagactggccgttccgtctcccttc
ccgcgtcggcacctggaggtcctcatcgccacgggcatatcgacctactatgcccagcgg
gaacagagtgtggaccgcatcagggcattggtgcggacgtttatccgctccagaaaaggc
aactacctgtgtttttttccctcctatgaatacatgaacatggttgccggccaatttgag
ggaaccgaggacggcgtccaggttctggtgcaggaccgcgaaatggatgacgccggccgg
gcgcggtttctcgagcgcttttcggcagaaaacgaccggaccctggtcggttttgccgtc
atgggggggattttcggagaggggatcgatctggtgggcgaccggctcagcggggccgtc
attgtgggggtgggattgccggccatctgcccggaaagggacctgattcgccggtatttc
gatggacagggggctggattcgactttgcataccggtatccgggcatcaaccgggtgctt
caggccgccggtcgggtgatccggacccatacggatcgtggtgccattttgctggtggac
cggcgatttttcagccccggctaccagcagctgctgcccgttcactggtccgccgcagtc
gttcgatcagaacggcaactggccgcacgcctccaccggttctggtcatccgccgtctga
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