Desulfosarcina alkanivorans: DSCA_13970
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Entry
DSCA_13970 CDS
T06544
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dalk03009
]
DSCA_13970
Ribosome biogenesis [BR:
dalk03009
]
Prokaryotic type
ribosomal protein modification factors
DSCA_13970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
TPR_1
TPR_2
TPR_12
TPR_8
RMD1-3
TPR_11
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_16
TPR_7
CFAP70_TPR_C
TPR_10
ANAPC3
PknG_TPR
TPR_15
TTC22_C
TTC22_N
DUF2753
HEAT_Nup120
BTAD
TPR_MalT
CFAP70_mid_TPR
Motif
Other DBs
NCBI-ProteinID:
BBO67467
UniProt:
A0A5K7YS42
LinkDB
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Position
1565602..1567341
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AA seq
579 aa
AA seq
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MKRTGPIKMTDAFKQATDDQDKVLRPEETVARVKQRMTTMDLKILDRTTRIDNGRLDIPV
FFSTCGHDARAVIGTKKQMGKGATPAQAEASAVMELAERFSFFSFYQNHEHTRLGTAAQF
ADNAISFDQIARSVHDESGDLEVSRQIFDSLPLRWTGAWSLTREKEVMVPLDWFYAINAF
NGPSAGNCVEEALSQGICEIVERHVSSVISRGQISTPLIDPASSTDRLVRQMLAKYDQAG
IRLTITDFTLDMGIPSVGVLAYDPDSFPAKSEIVWTAGTTPGPEKALSRALTEVAQLAGD
FNSGSNYVASGLPKFTRLEDADYVINAPGPIRLADLPDISNPNIRNEVEACVQALSRRDL
EVLVVDTTHPQLAVPAFYTIVPGTHFRERAAGTSVAMFAAKLTMERFGTDEAIGRLLEME
RLLPGKYFIQFYLGNCHLERNDPETALSHFSRALDLSPADQDIPSIYSYMGVCHKERGDY
AEALAVLAKGEALDQERTDIYNLMGFCHFMRKEHEAAIHNFEKVIDLDPGSAIDYANIAS
NYRDMGKKDEAVRYYRLALELDPSIDFARDNLNRLTGEN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtacaggccccataaaaatgacggacgccttcaagcaggcgaccgacgatcag
gataaagttctgcggcccgaagagaccgtggccagggtcaaacagcggatgacgaccatg
gatttgaaaattctggaccggaccacgcgaattgacaacggccggctggatatccctgtc
ttcttcagcacctgcggccatgatgcccgggccgtcatcggcaccaagaagcaaatggga
aagggcgcgaccccggcccaggctgaagccagcgcggtgatggagctggccgaacggttt
agttttttcagcttctaccaaaaccacgagcacacccggctgggaaccgccgcgcagttt
gccgacaacgccatctcctttgaccagatcgcccgttcggtgcacgacgaatccggggat
ctggaggtctccagacagatttttgactccctcccgttgagatggaccggtgcctggagc
cttacccgggagaaagaggtgatggtgccgctggactggttttatgccatcaacgccttc
aacggcccttcggccggcaactgcgtggaagaggccttgagccagggcatctgtgaaatc
gtcgaacgccacgtctcttcggtaatcagccgcgggcagatttccacaccgctgatcgac
ccggcgtcgtcaacggaccggctggtccggcagatgctggccaagtatgatcaagcgggc
atccggttaaccatcaccgattttaccctggatatgggaatcccttccgtgggggttctg
gcctacgatccggactcgttcccagccaaaagcgaaattgtctggacggccggcaccacc
cccggtcctgaaaaagccctgagccgggccctgaccgaagtcgcccagctggccggcgat
ttcaattccggctccaactacgtggcctcgggcctgcccaagttcacccggctggaagat
gcagactatgtgatcaacgcccccggccccatccgtctggccgacctgcccgatatttca
aacccgaatatacgcaatgaggtggaagcctgcgtccaggccctttcccgaagggatttg
gaagtactggtggtcgacaccacgcacccccagctggccgtgccggccttctacaccatc
gtaccgggcacccatttccgggagcgcgccgccggcaccagtgtggccatgtttgccgcc
aaactgaccatggaacgtttcggaacggatgaggccatcggcaggttgttggagatggag
cgattgctgcccggcaaatatttcatccagttctacctgggcaactgccacttggagcgt
aacgatccggaaacggcgctgtcccatttttccagggcattggacctttcaccggcagat
caggatattcccagcatatactcttacatgggcgtctgccacaaggaaaggggcgactat
gccgaagcccttgccgtgctggccaaaggagaggccctggatcaggaaagaaccgacatc
tataacctcatgggattttgccacttcatgcgcaaggagcacgaagccgccatccacaat
ttcgaaaaagtcatcgatctggatcccggttcggccatcgattatgccaacatcgcctcc
aactaccgggacatggggaaaaaagacgaggcggtccggtattaccggctggccctggaa
ctggatccgtccatcgattttgcacgggacaatctgaaccggctaaccggtgaaaactga
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