Desulfosarcina alkanivorans: DSCA_15550
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Entry
DSCA_15550 CDS
T06544
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dalk02000
]
DSCA_15550
Transporters [BR:
dalk02000
]
Other transporters
Pores ion channels [TC:
1
]
DSCA_15550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF5805
Motif
Other DBs
NCBI-ProteinID:
BBO67625
UniProt:
A0A5K7YGS7
LinkDB
All DBs
Position
complement(1734675..1736657)
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AA seq
660 aa
AA seq
DB search
MMFRWLGMGVVCLVMSIGAVSADEGEKGTSAVPTMDTVVVTAGRAAEKQKTLTNNVTVID
SDAIEQSPARDLGELLSEQGLSVRQEPGNLSTVSVRGFRTDSHGNDLKSKVLILLDGRRA
GTGNAAKIMTKNVERVEVIRGPASVQYGSAAVGGVINVITRQGSGKPAVFVEGGLGSWQY
EEASMGSQGAFYGLDFSATGTRSTMEDYQTSDGDTYRNTGYDEKENLSLNVGYSFNANHR
LGVIYTNFSVDEAGSPYYLSQNDLVSYVDNKNHTTDFVYDGSTVNDGFSWKLRYFTGKDK
YKYAAPDPLYPYVYEEITDREGAQAQITADLDMVTLTGGVDWVNYEIETTSAPARATYDN
PAGFLLAKAGLLDERLILSAGGRYDSYEVEIKEGEGGKEEDDRFTPNVGLAYLITDQLKL
RVNYGQAFVMPGADQLAADYIDPNSGAPISGNADLKPEKSATWEGGLDFSSNGLFASLTY
FHSDFEDKIEFVSLPDGSRSWDNLGEATISGIEGEINADLGALNDWDFVLRPYVRFTYLT
EFEDEDENRDLYYTPDWTASYGIAFSHWIGLSATFNVVYTGGQSVEDYENWNYIDPVEIV
TLGSSTVASLAITQTLLSSDRWGKLTLRGDITNLFDEDYAYVKGYPMPGRSFFLGLRYDI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgctggttgggtatgggcgtggtatgtctggtgatgtcgattggtgcggtg
tctgcggatgaaggcgaaaaggggaccagcgctgtccccaccatggatacggtggtggtt
accgcaggacgggcggccgaaaaacagaagacgctgaccaacaatgtcaccgtcatcgac
agcgatgccatcgaacagtcccctgcgcgggatctgggagaactgctgtcggagcagggg
ctttccgtccggcaggaacccggcaacctcagcacggtaagtgtccgcggattccgcacg
gactcccacggcaacgatctgaagagcaaggtgctgattcttctggacggccggcgcgcc
ggcacgggcaacgcggccaagatcatgaccaaaaatgtcgagcgtgtggaggtcatccgc
gggccggcctcggtgcagtatggatcggcggcggtcggcggggtcatcaatgtgatcacc
cgccagggcagcggcaagcccgcagttttcgtcgaaggcggcctgggcagctggcagtac
gaagaagcctccatgggcagccagggggcgttctacggtctggatttttcggccaccggc
acccgatccaccatggaggactaccagacgtccgatggtgacacctaccggaacaccggc
tacgacgaaaaggaaaacctgagcctcaatgtcggctacagtttcaatgccaaccatcgc
ctgggcgtgatctacaccaatttttcggtggacgaagccgggtctccctactatctcagt
caaaacgatctggtcagctatgtggacaacaagaaccatacgacagacttcgtttacgat
ggaagcaccgtcaacgacggtttctcctggaaattgcgctattttacaggcaaagacaaa
tacaaatatgccgctcctgacccgctttatccctatgtttatgaggaaataacagatcgc
gagggcgcccaggcccagattaccgctgacctggacatggttaccctcaccggcggtgtg
gactgggtgaactacgagatcgaaaccacctccgcaccggcccgcgcgacctacgacaac
ccggccggttttctgctggccaaagccggtttgctggacgagcgtctcatcctgtcggcg
ggcggccgctacgacagctatgaagtggaaatcaaagagggcgagggcggcaaagaggag
gatgatcgcttcacacccaacgtgggcctggcctatctgatcaccgaccaactgaagctg
agggtcaattacggccaggccttcgtcatgcccggcgccgatcagttggcggcggattac
atcgatcccaactccggcgccccgatttccggcaacgccgatctgaaaccggaaaaaagc
gccacctgggagggggggctggatttttccagcaacgggttatttgccagcctgacctat
tttcatagcgattttgaagacaagatcgagtttgtttcgctgccggatggaagccgttca
tgggacaatctgggagaagcgaccatcagcggcatcgaaggcgagatcaatgccgacctg
ggggcgctcaacgattgggacttcgtgctaaggccatacgtccgttttacctatttgacc
gaattcgaagacgaggacgaaaaccgggatctttattacaccccggactggacggcttca
tacgggatcgccttttcacactggatcggcctttcggccaccttcaacgtggtttacacc
ggcggccagtccgtggaggactacgagaactggaactatatcgaccctgtggagatcgtc
accctcggatcctcaaccgtggccagcctggccatcacccagaccctgctctcttcggac
cggtggggcaagctgaccctcaggggggacatcaccaacctgttcgacgaggattacgct
tacgtgaaagggtatcccatgcccggaaggagtttctttctgggactgcgatacgatata
tag
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