Desulfosarcina alkanivorans: DSCA_16560
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Entry
DSCA_16560 CDS
T06544
Symbol
pcrA
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dalk
Desulfosarcina alkanivorans
Pathway
dalk03420
Nucleotide excision repair
dalk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSCA_16560 (pcrA)
03430 Mismatch repair
DSCA_16560 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dalk03400
]
DSCA_16560 (pcrA)
Enzymes [BR:
dalk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSCA_16560 (pcrA)
DNA repair and recombination proteins [BR:
dalk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSCA_16560 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DSCA_16560 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
ResIII
NSF_ATPase_lid
Motif
Other DBs
NCBI-ProteinID:
BBO67726
UniProt:
A0A5K7YFB7
LinkDB
All DBs
Position
complement(1837012..1838862)
Genome browser
AA seq
616 aa
AA seq
DB search
MQLSPQQQAAVEHTGSPALVVAGAGSGKTRTLTAKFAHLVQSGLPPEHILAITFTNKAAE
EMKGRLIQMTGMGLSRFPWVRTYHSACFQILKAHSDRLDFHPPLQVFTTYHQQKTVKEVL
LGLNYDKKHAMGVLGQISNAKNSGHPGAYFDRHPRQGNIRLVDVYQKYEARLKAANAVDF
DNILLLTRNLLRDHADIRERYQAEFQYILCDEYQDTNDLNEEITALLLRDGNLFAVGDDW
QSIYSFRMSNVSHFLSFKKKYAGARIFRLEQNYRSADEIVQLGNRVIGHNESRMEKDCFS
EKEGGVVETHEFVTDQEEARWVADKVRSMVRMNIPYEKMAVLYRTKFCSLPFEQAFRRAH
IPYRMMGGKGFFDRVEILDLNCYITAAVFDKDDTAFERVLNTPKRGIGPGTVKKISGMRS
GSMSLKEAARQAVAERVLTPKLYNGLKALLALLDEIRDLAPDEAIRRVIARTGYMDHLEN
YTRSNSMDFTARQENIDQLIHAASQKETIVDYLEEAALVREDKDDEEESAGVNLSTVHGA
KGLEFHTVFVIGCEEQLFPHWRSMDSADDLEEERRLMYVAVTRAERCLFITSANFRKGQF
NPRSRFLEEIDSVLSE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcagctttcaccccagcagcaagccgctgtcgaacataccggatcgccggccctggtc
gtggccggcgccgggtcgggaaaaacccgtaccctgaccgccaaattcgcccacctggtc
caatcgggcctgccgccggaacacattctggcgattacctttaccaacaaggcggccgaa
gaaatgaagggccgcctgattcagatgaccggaatggggctttcgcgctttccctgggtg
cgcacttaccatagtgcctgtttccagatcctcaaggcacacagcgaccgccttgatttc
catccgcccctccaggtctttacgacctaccaccagcaaaagacggtcaaggaggtgctg
ctgggcctcaattacgataaaaaacacgccatgggggtgctcgggcagatttccaacgcc
aagaacagcgggcatcccggtgcatattttgaccgccatccccggcagggcaacatccgc
ctggtcgatgtctaccagaaatatgaagcgcgcctgaaggcggccaatgccgtggatttc
gacaacatcctgctgctgacccgcaacctgctgcgggaccatgcggacatccgggagcgc
taccaggccgaattccagtacatcctgtgcgacgaataccaggacaccaacgacctgaac
gaggagatcaccgccctgctgctcagggacgggaacctgtttgccgtgggcgacgactgg
cagtccatctattccttccggatgagcaacgtcagccactttctttccttcaagaagaag
tacgcgggcgcccggattttcaggctggagcagaactaccgcagcgccgacgaaatcgtg
cagctgggcaaccgggtgatcggccacaatgaaagccgcatggaaaaggattgtttttcg
gaaaaggaaggcggggtggtcgaaacccatgaatttgtcaccgaccaggaggaggcccgc
tgggtggcggacaaggttcgcagcatggtgcgcatgaacatcccatacgaaaagatggcg
gtgctctatcgcaccaagttctgcagcctgcctttcgagcaggcatttcgccgggcgcac
attccctaccgcatgatgggcggcaagggctttttcgaccgggtggagatcctggatctc
aactgctatatcaccgccgcggtgttcgacaaggacgacacggccttcgaacgggtcctc
aacacgcccaagcggggcatcggcccgggcaccgtgaaaaagatctcagggatgcgcagc
ggatccatgagcctgaaagaggccgcccggcaggcggtggccgaacgggtgctcacgccc
aaactgtacaacgggctgaaagcgctcctggcgctgctcgacgagatccgggacctggcc
cccgacgaagccatccggcgagtgatcgcccgcaccggatacatggatcacttggaaaac
tacacccgctccaattccatggattttaccgcccggcaggaaaacatcgaccagctgatc
cacgccgcctcccagaaagagaccatcgtggactacctggaagaggccgccctggtccgt
gaggacaaggatgacgaggaggaatccgccggcgtcaacctgtccaccgttcacggtgcc
aagggcctggagtttcacacggttttcgtgatcgggtgcgaagaacagctgtttccccac
tggcggtccatggacagcgccgacgatctggaagaggagcgccggctcatgtacgtggcg
gtgacccgggcggaacgctgcctgttcatcacctccgccaattttcgcaagggccagttc
aacccccgcagccggtttctggaagagatcgattcggtcctgtccgagtga
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