Desulfosarcina alkanivorans: DSCA_21190
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Entry
DSCA_21190 CDS
T06544
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dalk
Desulfosarcina alkanivorans
Pathway
dalk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSCA_21190 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dalk03021
]
DSCA_21190 (rpoA)
03400 DNA repair and recombination proteins [BR:
dalk03400
]
DSCA_21190 (rpoA)
Enzymes [BR:
dalk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DSCA_21190 (rpoA)
Transcription machinery [BR:
dalk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DSCA_21190 (rpoA)
DNA repair and recombination proteins [BR:
dalk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DSCA_21190 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SDA1_HEAT
Motif
Other DBs
NCBI-ProteinID:
BBO68189
UniProt:
A0A5K7YK06
LinkDB
All DBs
Position
complement(2365890..2366909)
Genome browser
AA seq
339 aa
AA seq
DB search
MVNNELMYMNWREMIKSDKVRVNSTDSYGKFVCEPLERGFGITLGNSLRRTILSSLYGAA
IVSVRFESVEHEFSVIPGVNEDVSEIILNLKEVRLKMDDVSPRTIRIDVSGEGAVTAGAI
TSDDGHVEILNPDHHIATLTGEGSLKMTMVVKVGKGYSLAEANKDEDAPIGTIPIDAVFS
PIKRVNYVVGNARVGQRTDYDKLTLEIWTDGSVLPEDAVAYSSKILKEQLSIFINFDEDS
EPQHDGSDDESEKPAFNDNLYRSVEELELSVRSANCLKNAEILKIYQLVQKTENEMLKTK
NFGRKSLNEIKEVLSEMGLSLGMKLDSFVPPEETVEEGE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggttaataacgaacttatgtacatgaactggcgtgaaatgatcaagtccgataaagtt
cgtgtcaacagcaccgactcctacggaaagttcgtctgtgaacccctggaaagggggttt
ggtatcactttgggcaactccttgagaaggactatactttcttctttatacggtgctgcc
attgtatccgtccggttcgaatctgtggaacatgagttcagtgtcatccccggggtgaat
gaggacgtgtcggaaatcatattgaacctcaaagaagtccggttgaaaatggacgatgtc
tcaccccggaccatccggattgatgtctctggagaaggtgcggttacggcaggggccatt
accagcgatgacgggcatgtcgagattttgaatccagatcaccatattgcgaccctcacc
ggtgaggggagtttaaaaatgaccatggttgtcaaggtgggcaaaggatactcgctggcc
gaggccaacaaggacgaggatgcaccgatcgggaccattcccattgacgccgtattttct
ccgatcaaacgggtcaattatgtggtgggtaatgcgcgggtcgggcagcgcaccgactat
gacaagctcacgcttgaaatatggactgatggaagtgttttgcccgaagatgccgttgca
tacagttcaaaaattctgaaagagcaattaagtattttcatcaattttgatgaagattct
gaaccgcaacacgatggcagtgatgacgagtctgaaaagcccgcatttaatgataatctg
tatcgaagcgtcgaggaattagaattgtcggtacgaagtgccaactgcctcaagaatgca
gagatcctgaaaatttatcagcttgttcagaaaaccgagaacgagatgctcaaaaccaaa
aatttcggccgaaaatccctaaatgaaattaaggaagtgttgtcggaaatgggactctcg
ttgggaatgaagctcgacagctttgtcccgcctgaagaaactgtcgaagaaggggagtaa
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