Desulfosarcina alkanivorans: DSCA_21570
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Entry
DSCA_21570 CDS
T06544
Name
(GenBank) hypothetical protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dalk01011
]
DSCA_21570
Enzymes [BR:
dalk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DSCA_21570
Peptidoglycan biosynthesis and degradation proteins [BR:
dalk01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DSCA_21570
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
NMB0315_dom_I
Motif
Other DBs
NCBI-ProteinID:
BBO68227
UniProt:
A0A5K7YU71
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Position
2396608..2398482
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AA seq
624 aa
AA seq
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MPSYIMRPIICLMLILFSGCAHQPADRTSEPTADAYLSPAVEVPSAEISPVPADPSPPDD
TVVVNQPSAMAAEWEVPPMVAPSDAEISVDSTEVIDPVAADPVSSANGIQQQLDEALVFC
EAAQDFWQKGELENALESLDRAYSLILTIEPDDPPKLVQQKEDLRFLISKRILEIYASRN
IVVNGNHNAIPREINANIQREINLFTRGPERRFFIESYKRSGKYRPMILRKLEAAGLPAE
LSWLPLIESGFKVKALSRARALGLWQFIPSTGYKFGLKRDQYIDERIDFEKSSDAAIAYL
KELHSIFGDWSTVLAAYNCGEGRVLRVIRTQNINYLDDFWDLFGRLPFETARYVPRFLAA
LHVIENLEKYGMADIDAYQPLVFETVDVNRQIHLKDLAVPLGTTREVLKELNPELRYSVL
PPRGYTVRVPVGKKDLLLASIDQVPVSSPPRPAFVYHRVKKGETLSTIARRYHTSVKKIM
WANNLKRSSYIVAGKKLKIPQRGMVITRAPATAPSPAAWNRKHVVKSGDSLWIIAKRYGT
TTQKIQKVNRLSTTRLRINQVLKVPSQKSAGATPSRGSATYYVRQGDSPYLIARKNNMSL
NHFLKINNLTPRSTIYPGQSVKIE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
ttgccttcctatattatgagacccattatctgtttaatgctgattcttttttccggatgc
gcccaccagcccgccgaccggacctccgaaccgacagccgacgcctatctgtcgcctgcc
gttgaagttcccagcgcagaaatcagtcccgtcccggcggatccgtccccgcccgatgac
accgttgttgtcaaccagccatccgcgatggcagccgaatgggaagttccgccaatggtt
gccccgtcagatgcagaaatttcagttgacagcaccgaggtgatcgaccctgttgccgca
gaccccgtttcttcagccaacggcattcagcagcaactggacgaagcattggtgttctgc
gaagccgcccaggatttctggcaaaagggggaactcgaaaatgccctggagtccctggac
cgggcctattccctgatcctgacgatcgaaccggacgacccccccaaactggttcagcaa
aaagaagacctgcggttccttatttccaagcgcatactcgaaatctacgcatcacggaat
atcgttgtcaatggcaatcacaatgccattccacgcgagatcaacgccaacatccagagg
gagatcaacctgttcaccaggggccccgaaaggcgtttttttatcgagtcctacaaacgt
tccggtaaataccgccccatgatcctgcggaaactggaagccgccggcctgcccgccgag
ttgtcatggctcccgctgatcgagagcggtttcaaagtcaaagcgctatcccgggcccgg
gcactggggttatggcagttcataccgtcaacgggctacaagttcggcctgaagcgagac
cagtatatcgacgaacgcatcgattttgaaaaatccagcgatgccgccatcgcctatctc
aaagaactccacagcattttcggagactggtccaccgtgctggctgcctacaattgcggt
gaggggcgggtgctgcgtgtgatccggacgcagaacatcaactacctggacgatttctgg
gatcttttcggccgcctgccctttgagaccgcgcgctatgtcccccgttttctggcggcc
ctgcacgtcatcgaaaacctggaaaaatacgggatggcggatatcgatgcgtatcagcca
ctggttttcgaaacggtggatgtcaatcgccagatccacctgaaagatctggccgtgccc
ctcggaaccacacgcgaggtcctcaaggaactcaaccccgaactccggtacagcgtgctg
ccccccagaggatacaccgtgcgggtaccggtcggcaaaaaagacctgctgctggcgtcc
attgaccaggtgccggtttcatcccccccccgccctgcattcgtttaccaccgggtcaaa
aagggggaaaccctgtccaccatcgcccggcgttaccataccagtgtcaaaaaaatcatg
tgggccaacaatctgaagcggtccagctatatcgtggccggaaagaagcttaaaatcccc
cagcgcgggatggtcatcacacgcgcgccggccacggcgccttctcccgccgcgtggaat
cggaaacacgtggtcaaaagcggcgattccctgtggattatcgccaagcgatatggtacg
accacccagaaaattcagaaggtgaaccgtctctcgaccacccggttgcgcatcaaccag
gtgctgaaggtcccctcgcagaaaagcgccggggcaacaccgtccaggggatcggcaacc
tattacgtgagacagggcgacagcccctatctcattgcccggaaaaataacatgtcactg
aaccatttcctgaaaatcaacaacctgaccccccggagcaccatctacccgggacagtcg
gtcaaaatcgaataa
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