Desulfosarcina alkanivorans: DSCA_22100
Help
Entry
DSCA_22100 CDS
T06544
Symbol
recD2_3
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dalk
Desulfosarcina alkanivorans
Pathway
dalk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DSCA_22100 (recD2_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dalk03400
]
DSCA_22100 (recD2_3)
Enzymes [BR:
dalk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DSCA_22100 (recD2_3)
DNA repair and recombination proteins [BR:
dalk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DSCA_22100 (recD2_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
Helicase_RecD
PIF1
PhoH
AAA_28
SLFN-g3_helicase
HHH_2
AAA_16
AAA_22
nSTAND3
HHH_3
NACHT
AAA_29
HHH_8
UvrD_C
AAA
TsaE
MacB_PCD
RsgA_GTPase
cobW
AAA_25
AAA_23
ABC_ATPase
AAA_24
ABC_tran
UvrD-helicase
AAA_5
ORC-CDC6-like
Herpes_Helicase
HHH
NTPase_1
NPHP3_N
ATPase_2
DAO_C
HHH_6
TrwB_AAD_bind
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
BBO68280
UniProt:
A0A5K7YJF6
LinkDB
All DBs
Position
2452679..2454874
Genome browser
AA seq
731 aa
AA seq
DB search
MTPPSDITLAGRIERVTYYNRENHFTIARLRSDENQRIITIKGTMPDPGVGDAIEVRGRW
ETHARYGQQLRFTGFRELLPATVDGIGNYLKSGFIKGVGPRLVDRIIGHFKADTLTVIET
QPERLTEVAGIGKKIARRIVDAWQSHHAARQLMRFLQKAGVSTAHTARLLREYGSNAIDI
LCNDPYRVAEDIPRIGFGIADAIVRHADTPVDEMDRARACMFHLFEQAVDQGHAYIARDR
LFDRCREDFDVDPETGTAALDHMVQAGELVVASEGDGASAPLVFPRGLHQAETVIARRIS
AMQAIPLAETPPDSRLITREVLERLSITLSVQQEEILSRMLAHKVSVITGGPGTGKTTLI
RSITAVMEGLKRRVMLAAPTGRAARRLSEVTGRPAATLHKALGYNLADGRFERTEDDPLA
ADVVVVDEASMVDTLLMAQLIRAVPITATLILVGDVFQLPSVGPGNVLADLIRSRTIMTF
ELTEIFRQDELSAIVVNAHRVRNGRPPVIVPPDDPDALSEFYFVEQADPERVVQTVVNLC
QREIPRRFRMTPIRDIQVLTPMHRGPVGTLNLNRVLQEALNPTGEQVAVMGSRFRVGDKV
IHLRNNYRKEVFNGDIGIVDSIDMENERAEVDYDGRKVAYDFVELDELGLAYAISVHKSQ
GSEYPAVVIPLLTQHYIMLQRNLLYTALTRAKQLVVMIGTTKALDVALRNDRPRQRRSML
AQRLKGENSGQ
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgacacccccctccgacatcacactggccggccgcatcgaacgggtcacctactacaac
cgggagaaccatttcaccatcgcccggctgcgcagcgatgaaaaccagcgcatcatcacc
atcaagggaaccatgcccgatcccggcgtcggggatgccatcgaggtccggggcagatgg
gaaacccatgcccgctatggtcagcagctcagattcaccggattcagggaactgctgccg
gccaccgtggacggcatcggcaattacctgaaatcgggattcatcaagggtgtgggaccc
cggctggtcgatcggatcatcggccatttcaaggccgacaccctgacggtgatcgaaacc
cagccggagcggctcaccgaagtggccggcatcggcaaaaaaattgcccggcgcatcgtc
gatgcctggcagtcccatcacgcggccaggcaactgatgcgattcctgcaaaaagccgga
gtgagcaccgcccataccgcccggctgctgcgcgaatacggcagcaatgcgatcgacatc
ctgtgcaacgacccctaccgggtggccgaggacattccccgcatcggtttcggcatcgcc
gatgccatcgtacggcacgccgacacccccgtggatgagatggaccgggccagggcctgc
atgtttcacctgttcgaacaggccgtggaccaggggcatgcctatatcgcccgggaccgg
cttttcgaccggtgccgggaggacttcgatgtcgaccccgaaaccggtacggcggccctg
gaccatatggtccaggccggcgaactggtggtggccagcgaaggggatggcgcgagtgcc
cccctggtcttccccaggggcctccaccaggccgaaaccgtcatcgcccggcggatatcc
gccatgcaggccatccccctggccgagacgccgccggacagccggctgattacccgggaa
gtcctggaacggctgtccatcaccctgtccgtccagcaggaggaaatcctctcacggatg
ctggcccacaaggtatcggtgatcaccggcggtcccggcaccggcaaaaccaccttgatc
cgctccatcacggccgtcatggagggcctcaagcgccgggtgatgctggccgcgcccacg
ggccgggccgcccggcggctgtccgaagtgaccggccgtccggcggccaccctgcacaag
gccctggggtacaacctggccgacggccgtttcgagcgcaccgaggacgacccgctggct
gccgatgtggtcgtcgtggacgaggcatccatggtggacaccctgctcatggcgcagctg
atccgggccgtccccataaccgcgaccctcatcctggtgggggatgtgttccagctgccc
tcggtggggccgggaaacgtgctggcggacctgatccgctcccggacgatcatgacattc
gaactgacggaaattttccgccaggacgaactgagcgccatcgtggtcaacgcgcaccgg
gttcgcaacggccggccgccggtcatcgtaccgccggacgaccccgacgccctttccgaa
ttctacttcgtggagcaggccgatcccgagcgtgtggtgcagacggtggtcaacctctgc
cagcgggaaattccccgacgcttccggatgacccctatccgggacatacaggtactcacc
cccatgcatcgcggtccggtgggcaccctcaacctcaaccgggtcctccaggaggccctg
aaccccaccggggagcaggtggcggtcatgggcagccggttcagggtgggcgacaaggtg
atccacctgcgcaacaactatcgcaaagaggtgttcaacggggacatcggcatcgtggac
agcatcgatatggaaaatgagcgcgccgaggtggactacgacggccgcaaggtggcctac
gacttcgtcgaactggacgaactgggcctggcctatgccatctccgttcacaagtcccag
ggatcggaatacccggcggtggtgattcccctgctcacccagcactacatcatgcttcag
cgcaacctgctctatacggcactcacccgcgccaagcagctggtggtcatgatcggcacc
accaaggccctggatgtggccctgcgcaatgaccgtccccggcagcggcgctccatgctg
gcccaacggctgaagggggaaaacagtggacagtga
DBGET
integrated database retrieval system
