Desulfosarcina alkanivorans: DSCA_25670
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Entry
DSCA_25670 CDS
T06544
Symbol
ihfB-1_2
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dalk03032
]
DSCA_25670 (ihfB-1_2)
03036 Chromosome and associated proteins [BR:
dalk03036
]
DSCA_25670 (ihfB-1_2)
03400 DNA repair and recombination proteins [BR:
dalk03400
]
DSCA_25670 (ihfB-1_2)
DNA replication proteins [BR:
dalk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSCA_25670 (ihfB-1_2)
Chromosome and associated proteins [BR:
dalk03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DSCA_25670 (ihfB-1_2)
DNA repair and recombination proteins [BR:
dalk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DSCA_25670 (ihfB-1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
BBO68637
UniProt:
A0A5K7YVE1
LinkDB
All DBs
Position
2868815..2869039
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AA seq
74 aa
AA seq
DB search
MNRFGLIQALKAADGRSRTEAESVVNLLFNTIIDALMEGGRVEIRGRRSIFVKEYQSDTG
PNPKTGEPFRITPE
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggttcggactgatccaagccctgaaggccgccgatggccgttccagaacagag
gccgaatcggtggtgaacctgcttttcaacacaataatcgatgcattgatggaaggaggt
cgagtcgaaattcgtggacgccgttccatttttgtcaaagagtaccaatccgacaccggg
cctaatcccaaaacgggtgagccgtttcggatcacaccggagtaa
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