Desulfosarcina alkanivorans: DSCA_30810
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Entry
DSCA_30810 CDS
T06544
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dalk03016
]
DSCA_30810 (truB)
Enzymes [BR:
dalk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DSCA_30810 (truB)
Transfer RNA biogenesis [BR:
dalk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSCA_30810 (truB)
Prokaryotic type
DSCA_30810 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BBO69151
UniProt:
A0A5K7YQB2
LinkDB
All DBs
Position
complement(3430837..3431748)
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AA seq
303 aa
AA seq
DB search
MPTELDGIVVVDKPEGLSSAGVVARVKGLFGANKVGHTGTLDPFATGVLICCLNRATRLS
RFFLEGDKAYEAEMVLGRVTDTQDATGTVIERHPVDRLSVEQIREAAARFVGATTQVPPV
YSALKHQGTPLYKLARRGEAVEKPARPIRIHRLDILDVNLPAVRFSVSCSSGTYVRTLCA
DIGRELGCGGHLRRLRRTASCGFSIHAAVGLDELAAFRDQGRLHEAMIPMSAALPFMPAA
VADGALALKIQNGVKLSAADIPDSPRVSDKGAFKVVDAGGRLIAVLTESPETRSYNYCCV
FSR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgccaactgaattagacggcattgtcgtggtggacaaacccgagggactttcgtcagca
ggcgtcgttgcgcgggtcaagggcctcttcggggccaataaagtcggccataccgggacg
ctggatccgtttgccaccggtgtcctgatttgctgcctcaaccgggcgacccggctgtcc
cgtttttttctcgagggcgacaaggcctacgaggcggaaatggttctgggccgggtgacg
gacacgcaggacgcgacgggaaccgtcatcgaacggcacccggtggaccggctgtccgtg
gaacagatccgggaagccgcggcgcgtttcgtgggcgccaccacccaggtcccgccggta
tactcggccttgaagcaccagggtacgccgctttataaactggcacgccgcggagaggcc
gtggaaaagcccgcccggccgatacggattcaccgcctggacattctcgacgtgaacctg
ccggcggtccgcttctcggtgtcctgttcatccggaacctatgtgcgcaccctgtgtgcc
gacatcggtcgcgaactgggctgcggcggacatctcaggcggcttcgccggacggccagt
tgcggattttccatccatgccgccgttggcctggatgaactggcggcattcagggatcaa
ggccgtcttcatgaagcgatgattcccatgagcgcggcgctgccattcatgccggctgcg
gttgccgatggcgcactggctttaaaaattcaaaacggggtgaagctgtcggcggcggat
atcccggattcaccccgggtatcggataagggggccttcaaggtggtcgatgccggcggc
cggttgattgccgttttgaccgaatcgccggaaacacgcagttataattattgttgtgtt
ttttcgaggtaa
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