Desulfosarcina alkanivorans: DSCA_34990
Help
Entry
DSCA_34990 CDS
T06544
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dalk01002
]
DSCA_34990
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dalk01011
]
DSCA_34990
Peptidases and inhibitors [BR:
dalk01002
]
Cysteine peptidases
Family C82
DSCA_34990
Peptidoglycan biosynthesis and degradation proteins [BR:
dalk01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
DSCA_34990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_isomerase_N
Motif
Other DBs
NCBI-ProteinID:
BBO69569
UniProt:
A0A5K7YNX2
LinkDB
All DBs
Position
3915383..3917128
Genome browser
AA seq
581 aa
AA seq
DB search
MKTSLTKTALSRVATLFLLAAGFLTTAMTGGSLLAHAAGPDIDRVQKAIQTRLDGGTAIE
ALSCQGEMICGIRMLPRAYDNRNYLPLWIDASLRLEKAEALAGAIGRADEDGLVPQDYHI
EAIDGLLAEICEQASAAGPDSVAAELWADLDLILTDAFLLYGSHLAAGRVNPETLHNDWK
INPVAADLLSSLVAAASSGDVDGALAQLRPAHSGYSTLRSALARLRRLAASGGWPLLGAD
RTLRPGDRDAAVGGLRHRLTVTGDLEQAFHEDDALLFDAGTESAVRRFQQRHGLKVDGIV
GPDTYGMLNVPVSQRIRQVVLNLERWRWLPHDLGSRYILVNTADFNLKAVENGRVGLQMR
VVVGRPARRSPVFSARMTYLVVNPYWNVPTTIAVQDILPELQKDITYLSSKGIRVFENWE
RDAPEIDPATVDWQAYHANRFPFRLRQDPGPYNALGRIKFMFPNQFAVYLHDTPNRALFK
RAQRDFSSGCIRLESPEALADFVLADDPRWAAETLADVFREKDRRIIRLKHPIPVHLLYM
TAWVDATGSIQFRSDIYDRDRDLAQALSQRRPNQPPDFVRR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctcattgacaaagacagcattgtcccgagtagcgaccctgttcctgctggcc
gccggctttctgaccactgccatgacggggggctccctgctcgcccatgcagccggtccc
gacatcgaccgggttcagaaggccatccaaacccgtctggacggcggcaccgccatcgag
gccctgtcctgccagggagaaatgatctgcggcatccgaatgctgccgcgggcctatgac
aaccgaaactatctgcccctgtggatcgatgcctcgctgcgactggaaaaagcggaggcc
ctggccggggccatcggtcgtgccgatgaagatgggctcgtaccgcaggactatcatatc
gaggccattgacggcctgctggccgagatctgtgaacaggcctccgcagcgggtccggat
tcggtggctgccgagctgtgggcggacctggatttaattctcaccgatgcctttctcctg
tatggctcccatctggcagccgggcgggtaaacccggagaccttgcacaacgactggaaa
atcaacccggttgccgcggacctgctgtcatcgctcgttgcggccgcctcatccggggat
gtcgatggggcattggcacaattgaggccggcgcacagcggttattcgacgcttcgaagc
gcgttggcccgactgcgccgattggccgcctccggcggctggccgctgctgggtgccgac
cggacactcaggccgggtgaccgggatgcggctgtgggcggccttcgccatcggttgacc
gtgaccggtgacctcgaacaggccttccacgaagacgatgcgttgcttttcgatgccggg
accgaatcggcagtaaggcggtttcagcagcgccacgggctgaaggtcgacggaatcgtg
ggccccgacacgtacgggatgttgaacgttcccgtcagccagcgcatccgccaggtggtt
ctcaatctggaacgatggcggtggctgccccatgacctgggatcccggtacatccttgtc
aacacggcagactttaacctaaaagccgttgaaaatggccgggttggcctgcagatgcgg
gtggtggtgggcaggccggccagacgttcaccggtgttcagcgcgagaatgacgtatctc
gtggtcaacccttactggaatgtgcccaccacgatcgccgtccaggatatcctgcccgag
cttcaaaaagatatcacctacctgtcctcgaagggcatccgcgttttcgagaactgggag
agggacgcacctgaaatcgacccggccaccgtggactggcaggcctaccatgccaaccgc
tttcccttcaggctccgccaggatcccgggccctataacgccttggggcggattaaattc
atgttccccaaccagtttgccgtatacctgcatgacacgcccaaccgcgccctcttcaag
cgggcccagcgggatttcagctccggctgcatccgtttggaatcacctgaggcgcttgct
gatttcgtgctggccgacgacccgcgctgggcggcggagacgctggctgacgtcttccgg
gaaaaagaccgccggattatccggctgaagcatccgattcccgtccatctgttgtacatg
accgcctgggtggacgcaacggggagcatccagtttcgcagcgacatttatgaccgagac
cgggatctggcccaggccctgagccagagaagaccgaaccagccgcctgattttgtccgc
cgatag
DBGET
integrated database retrieval system
