Desulfosarcina alkanivorans: DSCA_42590
Help
Entry
DSCA_42590 CDS
T06544
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dalk
Desulfosarcina alkanivorans
Pathway
dalk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSCA_42590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dalk03000
]
DSCA_42590
03400 DNA repair and recombination proteins [BR:
dalk03400
]
DSCA_42590
Enzymes [BR:
dalk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DSCA_42590
Transcription factors [BR:
dalk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DSCA_42590
DNA repair and recombination proteins [BR:
dalk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSCA_42590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BBO70329
UniProt:
A0A5K7YR00
LinkDB
All DBs
Position
complement(4782211..4783686)
Genome browser
AA seq
491 aa
AA seq
DB search
MNMDKLMDRAACDRARRARDPRFDGLFFTGVKSTGIYCRPICPAPSPRPENIVYYPTAAA
AAAAGLRPCLRCRPETAPGTPAWNGTSATVARAMHLIRQGALDGGSVKDLAVRLGIGTRH
LDRLFRRHIGATPKAIADNQRLLFAKRLVVETDMPITQAALAAGYGSIRRFNAAFRQRLG
RSPSQLRGRRPQARRVTGSASSCILTLTYRPPYDWERMLAFFRARAIPGVEWADGKVYRR
TIRPSAARGAIAVRHAPKGHALELAVDLPDNRQLMTVVARVRRMFDLDANPQAIHRTLNR
DPLLAERVGRLPGLRLPGSWDPFETAVRAVVGQQVSVKGAVTQLGRIARLAGTPYQEEGE
PHLTRLFPRAEDLAAADMAAIGMPRKRKETLRQLAQRVASGALRLESVMDLPRFVVALTA
IPGIGDWTAHYVAMRALGEPDAFPAADLGLLKALQEGQRRPTEKEAGERAEAWRPWRAYA
AIYLWMGQEEK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
ttgaacatggacaaactcatggatcgcgccgcctgcgaccgcgccagacgggcccgggac
ccgcgctttgacggcctctttttcaccggcgtcaaaagcacgggcatctactgccgcccc
atctgcccggccccttcaccccgtccggaaaacatcgtctattatcccacggccgccgcc
gctgccgccgccggtctgcgcccgtgcctgaggtgccgtcccgagactgccccgggcacc
cccgcctggaacggcacatcggccaccgtcgcccgggccatgcatctgattcgccaggga
gctctggacggcgggtcggtgaaggatctggccgttcggttgggcatcggcacacggcac
ctggatcggcttttccgccggcacatcggggccacccccaaggccatcgccgacaaccag
cgccttctgttcgccaaacggctggtcgtggagacggatatgcccatcacccaggcggcc
cttgccgccggatacggcagcatccggcgcttcaatgccgcctttcgccaacggctcggc
cggtcgccgtcgcagcttcgcggccgtcgcccccaggcacgccgtgtcaccgggtccgca
tccagctgcatcctgaccctgacttaccggccgccctatgattgggagcggatgctggcc
tttttccgcgcacgggccatccccggggttgaatgggcggatggcaaggtctatcggcgg
acgatccgcccgtctgccgcccggggagccatcgccgtaagacatgccccgaagggccat
gccctggaactggcggttgacctgccggacaaccgccagttgatgaccgttgtggcgcgg
gttcgccgcatgttcgacctggacgccaatccccaggccatccaccggaccctgaaccgg
gaccctctgctggccgaacgggtgggcaggctgccggggctgaggcttcccgggtcatgg
gatccctttgaaacggcggtacgggcggtggtgggccagcaggtgtcggtaaaaggggcc
gtcacccagctgggccgcatcgcccgcctggcgggaacgccgtatcaagaggaaggcgag
ccccatttaacacggctgtttccgcgggctgaagacctggcggcagcggatatggcagcc
atcggcatgccccggaaaagaaaagagaccctgcggcaattggcgcagcgcgttgcttcg
ggggcgctgcggctggagagcgtcatggatttaccccgctttgtggttgcgctgaccgcc
atacccggaatcggcgactggacagcccactatgtggccatgcgtgccctgggagagccc
gacgcctttccggcggcggacctggggctcctgaaagcgctgcaggaagggcaacgccgg
ccgacggagaaggaagccggggagcgtgccgaggcatggcgtccctggcgcgcatacgca
gcgatctacctgtggatggggcaggaggaaaaatga
DBGET
integrated database retrieval system
