Desulfosarcina alkanivorans: DSCA_43260
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Entry
DSCA_43260 CDS
T06544
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dalk02000
]
DSCA_43260
Transporters [BR:
dalk02000
]
Other transporters
Pores ion channels [TC:
1
]
DSCA_43260
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Ortholog
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GFIT
Motif
Pfam:
OmpA
VWA_2
VWA
VWA_3
TSP_3
VWA_CoxE
DUF748
Motif
Other DBs
NCBI-ProteinID:
BBO70396
UniProt:
A0A5K7YMF9
LinkDB
All DBs
Position
complement(4850266..4851537)
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AA seq
423 aa
AA seq
DB search
MMKFTVRHLFVSLLAAAFISACATPRHPLPDFDAHPVDPGTYERKTEHLVFVLDASSSMA
EAHRGYLKLDVARGVINNFNHTMPDLDVDVALHSFGHAPSVSTASSAIMLPAQPYSRDAL
SSAVEKVTEAGGISPLARALDDARTALEPEKGRIAMVIISDGKDMKTGTRAAAEALAADH
GDRLCIYTVQVGDSAEGADLLDRLARISGCGEGVTAQGLESGAAMNAFVHKVLLTVRSDS
DGDGVADAIDRCPDTPRGIGVDADGCPLDSDKDGVLDTTDACPDTPVGTPVDAQGCPMPR
AEATPGELTAAGTWRYEDIQFENNKAVLKASAYPILNEITAAMQAHPELNVEIHGHTDGS
GARAYNLDLSRKRAASVKAYLESRGIDAARMSTKGFGPDRPIDSNATQEGRARNRRVEFK
PIQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaattcactgttcgacacctgttcgtatctcttctggccgctgcgttcatctct
gcatgcgcgacccctcgccatccgcttcccgattttgatgcccatccggtcgatccggga
acctatgagagaaaaaccgaacatctggtctttgtcctggacgcttccagttccatggcg
gaggcccaccgggggtatctgaagctggacgtcgcccggggcgtaatcaataacttcaac
cacaccatgcccgacctggacgtggacgtggcgctgcacagtttcggtcatgccccctcg
gtatccacggcatcctccgcgatcatgctgcctgcacagccctactcccgcgatgcactg
tcatctgcggttgaaaaagtgactgaagccggcgggatcagtcctttggcccgcgccctt
gacgacgcaagaacggccctcgaacccgagaaaggccggattgccatggtcatcatcagt
gatggcaaggatatgaaaacgggtacccgtgccgccgctgaagcgttggcagccgatcac
ggagaccggctgtgcatctataccgtgcaagtgggggactcagccgagggcgcggacctg
ctggaccggctcgcccggatatccggttgcggagagggcgtgacggcacaggggctcgag
tcaggagcggccatgaatgcatttgtccacaaggtcctgctgaccgtcaggagtgacagt
gatggcgacggggtggcggacgccatcgaccgctgtcccgacaccccccgcggcattggg
gtggacgccgacggatgccccctggacagtgacaaggatggcgtcctggacaccactgat
gcgtgcccggacacaccggtgggcaccccggttgatgcccagggatgcccgatgccccgg
gctgaggccacgcctggtgagctgaccgctgccggcacctggcgctacgaggacatccag
ttcgaaaacaacaaagccgttttaaaagcaagtgcgtaccccatcttgaatgaaattacg
gccgccatgcaggcccatccggaactgaacgtggaaatccatggccataccgacggcagc
ggcgcccgggcctacaatctggacctctcccggaagcgggccgcatcggtcaaggcctat
ctggaatcccggggaatcgacgccgcccggatgagcaccaaagggttcggtccggatcgc
cccatcgacagcaatgcgacccaggaaggccgggcccgcaaccggcgggtagaattcaaa
cccatccagtag
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