Desulfosarcina alkanivorans: DSCA_45110
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Entry
DSCA_45110 CDS
T06544
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dalk
Desulfosarcina alkanivorans
Pathway
dalk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSCA_45110 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dalk03019
]
DSCA_45110 (recQ)
03400 DNA repair and recombination proteins [BR:
dalk03400
]
DSCA_45110 (recQ)
Enzymes [BR:
dalk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSCA_45110 (recQ)
Messenger RNA biogenesis [BR:
dalk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DSCA_45110 (recQ)
DNA repair and recombination proteins [BR:
dalk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSCA_45110 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Zn_ribbon_4
Zn_ribbon_5
ResIII
Zn_ribbon_Brz
Motif
Other DBs
NCBI-ProteinID:
BBO70581
UniProt:
A0A5K7YU52
LinkDB
All DBs
Position
5052478..5054541
Genome browser
AA seq
687 aa
AA seq
DB search
MNLTCPECRSVFKLDPGEAGTESAGVQCPACGHAYQVVLSAQQNDMPQEWDYLENGMPVE
PEAPESMAADWDDPAPVPPASYRDMPPETVLDTVFGYQTFRDNQKMVIDTLLAGRDAFAL
MPTGSGKSLCFQIPSLIRPGVGVVVSPLIALMQDQVTDLRQVGVRAHFLNSSLPAAEAAR
VEAIAAGGQCDLLYVAPERLLTDRFQRLLSNMKLALFAIDEAHCVSQWGHDFRPEYLQIA
SVTQRFPGVPRIALTATADPATRRDIVEKLHLAGAVRVVASFDRPNIFYRIRIKQNDKRQ
LLTLLRERHGGHAGIVYLRTRKRVDAIARWLREKGIAALPYHAGLDAEVRRRHQQRFLME
DGLVMVATIAFGMGIDKPDIRFVAHLDLPASMEAYYQETGRAGRDGQPAEAWLFYSLADV
VAMRTLQNLSSGNEAFKSVLQRKLGAFLGFCESPECRRRGLLGYFGESYTPPCNCCDNCT
EPVDTWDGTIAAQKALSCVYRTGQRFGAVYLIDVLTGRASERMERLGHHRIKTFGAGQDL
EPKQWHSVFRQLLAAGYLDADMAARSGFRLNESSWNILRGEQPVRLKKDPEPVKATAGKK
SARGSRVTFSDAASSALWERLRQLRLDISRELNVPPYVIFHDRTLEEMVVCRPSSHSDLL
KISGVGQSKLDRFGDQFLAVISSGGDG
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgacctgccctgaatgccgatcagttttcaagctcgatcctggagaggccggc
actgaatccgccggggtccagtgcccggcctgcggtcacgcctaccaggtggtcctttcg
gcccagcagaacgatatgccgcaggaatgggattacctggaaaatggtatgcccgtggaa
cccgaggcgccggaatcaatggccgcggattgggatgacccggcaccggtccctccggca
tcgtacagagatatgccacccgaaacggtcctcgatacggtgttcggctaccagacgttc
cgggataaccagaaaatggttatcgatacgctgcttgccgggcgtgacgcctttgccctc
atgcccaccggcagcggcaaatccctgtgttttcagatcccctccctcatccggcccggt
gtgggcgtggtggtttcaccgttgattgccctgatgcaggaccaggtgacggacctgcgc
caggttggggtccgggcgcattttctcaattccagcctgcccgccgccgaggccgcccgg
gtggaagccatcgccgccggcgggcaatgcgacctgctctatgtcgccccggagcgcctg
cttaccgatcggttccagaggttgctgtccaatatgaagctggcgctgttcgccatcgac
gaggcccactgcgtctcccagtggggacacgatttccggcctgaataccttcagatcgcc
tcggtgacccaacgtttcccgggggtgccgcgaattgccctgacggccaccgccgatccg
gcgacccgccgggatatcgtggaaaagctccatctggcaggcgccgtccgggtggttgcc
agctttgaccgtcccaatattttttaccgcatccggatcaagcagaacgataaacggcaa
ctgctcacccttttgcgcgaacgacacggcgggcacgcgggcatcgtatacctccgcacg
cgcaaacgggtcgatgccatcgcccgctggctccgggaaaagggcattgcggcgctgccc
taccatgccggcctggatgccgaggtccggcgtcgccatcagcagcggtttttgatggaa
gacggattggtgatggtggccaccatcgccttcggcatgggcatcgacaagcccgatatt
cgtttcgtggcccaccttgacctgcccgccagcatggaggcgtattaccaggaaaccggc
cgggccggccgcgacggtcagccggccgaggcgtggctgttctattcactggccgatgtg
gtggccatgcgaaccctgcagaacctttccagcggaaacgaggccttcaagtcggtcctg
cagcgcaagctcggcgcctttctgggattttgtgaaagccccgaatgccggcggagaggc
ttgctgggttatttcggcgagtcctacaccccgccgtgcaactgctgcgacaactgcacc
gaaccggtggacacctgggacggcaccatcgccgcccagaaggccctgtcctgcgtgtat
cgcaccggccagcgtttcggtgcggtctatctcatcgatgtgctgaccggccgggcctcg
gagcggatggaacgcctgggccaccatcgcataaaaaccttcggcgcggggcaggacctg
gaaccgaaacagtggcactcggtgtttcgacaattgcttgccgcaggctatctggacgcg
gatatggcggccagaagtggctttcgcctgaacgaaagcagctggaatatactcaggggc
gaacagccggtacgattgaaaaaggatcccgaaccggtcaaggcgacagcgggaaagaaa
tcggcgaggggatcgagggtcaccttcagcgacgcggcatcgtcagccttatgggagcga
ctgaggcagcttcggctggatatctcaagggaattgaacgttcctccctatgtgattttt
catgaccgtacccttgaggagatggtggtctgccgaccttccagccattcggatttgctg
aaaatttccggtgtcggccaaagcaagcttgaccggttcggcgaccagtttctggcggtt
atctcgagtggcggggacgggtaa
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