Desulfosarcina alkanivorans: DSCA_45950
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Entry
DSCA_45950 CDS
T06544
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K06714
arginine utilization regulatory protein
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dalk03000
]
DSCA_45950
Transcription factors [BR:
dalk03000
]
Prokaryotic type
Helix-turn-helix
Other families
DSCA_45950
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
PAS_9
PAS_4
AAA
PAS
AAA_7
AAA_16
HTH_30
Bac_DnaA
AAA_22
AAA_3
Motif
Other DBs
NCBI-ProteinID:
BBO70665
UniProt:
A0A5K7YQR4
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All DBs
Position
5142612..5144135
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AA seq
507 aa
AA seq
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MDSSQIKRLFPDVDPASVSLVDVLADFHEGIMITDAEGVVLYMNAAQARIDDLEIDAAVG
KKVTDLYRVDEGFSPTMACLKAGAAVKNLACYYRTHLGRVVNSIHNIYPITSGKRVVGTI
CYITDYRNIENTFDTVMQSTPPRSVPTYGIAQPVDAAKPKKNGTRYTFRDIVGRSPDLLT
AVKAAKLSAESPSPILIYGETGTGKELFAQAVHNRSPRKTHPYMAINCAAIPENLLEGIL
FGTSAGAFTGAIDKPGLFEKAAGGTLLLDEINSMPLTLQAKLLRFLQERKIRRIGAMGEI
DVDLKIISSINVPPHRAIESGGLRSDLFYRLAVVFIQIPPLRQRMGDLNRLVLHFLARKN
RKLGKQVSGIDMKVMEAFEQYAWPGNVRELEHVIEGAMNLAGAAKVIELSHLSVPLDKKG
GGHALPQQAPGGSRGRIRLRLPAAREGETPGGKTLAEMKTDQEMVSIVSALQETRGNAAR
AARKLGISPQLMNYKLKRFNIDRKDYR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggacagttcccagatcaagcggttgttccccgacgtcgatccggcctcggtctccctg
gtcgatgtgctggccgattttcacgagggaatcatgatcaccgatgccgaaggcgtcgtc
ctttacatgaacgccgcccaggcccgcatcgatgacctggagatcgatgccgccgtcggc
aaaaaggtgacggacctgtatcgcgtggacgaaggcttcagccccaccatggcctgcctg
aaggccggggcggccgtaaagaacctggcctgctactaccgcacccacctggggcgggtg
gtcaattccatccacaacatttacccgattacctcggggaaacgggtggtcggcaccatc
tgctacattaccgattaccgcaatatcgagaacaccttcgatacggtgatgcagtcgacc
ccgccccgctccgtgcccacttacgggatcgcccagcccgtggatgcggccaaaccgaaa
aaaaacgggacccgctacactttcagggatatcgtcggccggtcgccggatttgctcacg
gctgtcaaagcggccaaactttccgcagaatcgccgtcccccattctcatttatggagag
accggcaccggcaaggagcttttcgcccaggccgtccacaaccgcagtcccaggaaaaca
catccctacatggccatcaactgcgccgccatccccgagaacctgcttgaggggatcctg
ttcggcacctccgccggcgcctttaccggtgccatcgacaagcccggcctgttcgagaag
gctgccggcggcaccctgctgctggacgaaatcaactccatgccgctgaccctgcaggcc
aaactgctgcgttttctccaggaacgcaaaatccggcgcatcggtgccatgggggagatc
gatgtggatctgaagatcatcagctcgatcaatgtcccgccccaccgggccatcgaatcg
ggagggctgcggtccgacctgttctaccgcctggccgtggtgttcatccagataccgccg
ctgaggcagcgcatgggcgacctgaaccggctcgtcctgcatttcctggcccgcaagaac
cggaaactgggcaaacaggtctccggcatcgacatgaaagtgatggaggctttcgaacaa
tacgcctggccgggcaatgtccgggaactggagcatgtcatcgagggtgccatgaacctg
gccggggcggcaaaggtgatcgaactgagccacctttccgtaccattggataaaaaaggc
ggcggtcatgccctgccgcagcaggcgcccgggggatcgcgcggccggatccgactgcga
ttgccggcggcccgtgaaggagaaaccccaggggggaaaacccttgcggagatgaagacc
gaccaggagatggtttcgatcgtcagcgccttgcaggaaacccggggcaacgccgcccgg
gcagcccgtaaactgggaatctccccccagttgatgaattacaagctcaagcggttcaac
atcgaccgcaaagactatcgatga
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