Desulfosarcina alkanivorans: DSCA_48500
Help
Entry
DSCA_48500 CDS
T06544
Name
(GenBank) hypothetical protein
Organism
dalk
Desulfosarcina alkanivorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF285
Cadherin_4
DUF4347
Big_9
Laminin_G_3
He_PIG
Cadherin_5
HpiC1-like
Lactonase
Reelin_subrepeat-B
Cadherin_3
Pentaxin
Motif
Other DBs
NCBI-ProteinID:
BBO70920
UniProt:
A0A5K7YRC3
LinkDB
All DBs
Position
5447403..5457443
Genome browser
AA seq
3346 aa
AA seq
DB search
MLTKLTNLFGRRNARKHPETLRYEELEPRVLFSADLAPGPDTLAVEEQVVAAEVTEDTPI
ENPAETETAEPSALQAGLELVFVNDNVAGYEQLIANLQQSDDTRIIDVVKLDADRDGIGQ
VSDILSGYSDLAAVHFITYGADGQIQLGSTWLDGTGLNQNSDAVAGWGDAMTDTGDILFY
GCNFAAGSDGQGLLNTIGALSGADVAASDDLTGHASLGGDWDLESKVGDVETGVIVTDIA
QDQWVGALDTTTITVTNFGFEQPNTAKQNDWESVPGWSSDSVASASGVEAVATTEGTWRG
YLWSTDPSVWQLTDHDILAGKTYELNVDSKISSVAGELTMRLYYDDGGTRTEIASQTIDT
LATDIMNTCTISFDSDDVPAAIGQKLGIEFENTVGTSGWIGLDNVQLAYSAANNAPVLSG
ANNLTTIDEDDFTNSGTLVSDLISDQVTDADSGASLGIAVIAVDDTNGTWQYTTDGGSNW
YAFGTVDDANARLLAADANTSVRFVPDADWNGTVTNGITFHAWDQTSGTAGGTADLTMTY
TVRDEFSTASYSNNDGSASWASSWIEGNDDNVATSGLVRITGDALRLESDVIDAGSESAQ
RAADLSTATNATLTFDFETNLSVDPSDSIVLEISDNGGSSWSTLEIFTGISGRSTGSRSY
DISAYATADTQIRLRIDSGYRGFAEYFFVDNVQVEYTVVINVGGTSAFSTATASSSVTVN
SVNDAPVLLTGSVDNLTVNEDSGLTSLGLGSVTYGPGGGGNESSQTLSYAVTVIPPPSFG
DIFLADGTTRVTTGSYTLAQIQGMQFKPADEQSGSSAFQFNVTDSGGTTNGGSDSISQFM
TITVDGVNDAPTFDMGTFDISSATVAESFSVGGEDGLPYGLSFSPDGSTLFVLGNSSDAI
YAYSLPAPFQLVVAGMSATHTQTLSIGSEEATPLDFAFNNDGSKLFLIGNTDDAVVEYSL
SAAFDLTTATYSGALEEFNVAAQTGSPQTVTFNDDGTKLLISNSNDGVFGYDLSVAFDVS
TAAYSGETTTLSGPTGIRDIQFNSDGTKLYAVDSGLATIFEYDLSIAFDVSTAVYAGVGE
ALNVSAAATNPRAMAFSDDGSRLFVADSDAEAIIAYDLATMSSLNGNVSFTEGGAAVVLD
VDAHISDAELDALSGGLGNYAGASLTLVRNGGASSEDVFAFNDGNGITLSGGNLSNASGI
IGTFDITTTPGQLVISFSDAAEIPTSADVDKVLQQITYANSSDVPPVSVQIDWTFTDGNT
GSQGTGGAQQATGSTAVTITAVDGHAPVAVDDAFTISAGVPITVDPLANDSDVDGDILTV
TQIIDTTNGNAATNLVNSGDTATLASGTVIELRADGRLKVTATSAGSESFDYVVTDDKGN
SDTGTVDLTVGDDQATAETIGFVTTWNTENSGASDNTTITIPIGSGDTNFIVYWGDGSSS
THSAGPVSHTYGSAGEYTVAIVGDLPGINFDGGGDGDKLTSIEQWGNIAWQDLDDAFDGA
SNLVINATDAPDLSGITDLSEMFKNATSINTDLSNWDTSTITNMQNMFYGASSFNQNIST
WDTSNVTDMSGMFYGASSFNQDIGGWDTSSVTDMDLLFRDASAFNQDIGGWDTSNVTSMV
QMFMEATTFNADISGWNTSNVTTMESMFENAQAFNQTIGGWDTSSVTTMSRIFALADSFN
QNIGAWDTSSVTDMRDMFLDADVFNQDIGAWDTSSVTSMHGMFARAYAFNQDIGAWDTSN
VTTMQSTFWAAIAFNQDIGGWDTSSVTTMRNMFRSAYAFDQDIGSWVVNNVTDMNYMLRS
SGLSIANYDATLIGWASQDVQTGVTLGATGLEYSGNGIAAVNTLTTTYGWSIIGHTLTNT
APTYDGTLDGNPNYVENGAAVALDADINISDAELDAFNGGLGNYAGSSLTLLRNGGASSD
DVFSFNDGNGITLSGGNLIKNSQVIASFDVTTTAGEVVITFTDANVEIPTSADVDNILRQ
VTYANSSDAPPASVQIDWTFTDGNTGSQGTGGALQAVGSTTVSITPVNDPPVIGGVDTGS
VTEDVDPDADGLLESGAALTIADPDTGQSSFVAETVSGAYGSLTIDAAGNWRYAADNTQA
AIQQLDAGQSVTDTLTVTTADGTTQTVTITISGAEDSPFVANVIADQSAAEGVAFNFTFA
ADTYNDVDVSDSLTYTATLDDDSVLPAWLGFDGTTRTFSGTPAGTDVGTISVKVTADDGS
SAAFDIFDIVVNPNNVPVIGGLDTGSVTEDVDPDADSLLEAAGALTIADADAGESSFVAE
TITGAYGDLTIDAAGNWSYRADNSQAAIQQLDAGESVSDTLTVITADGSTHDVTITINGT
EDAPIARPEGVYLTFDGDDFIQVADDPSLQMTDNVTMEAWINHSGSGTGTQIIVNKEGEY
EMGVVADTGEIIHAIADASSNWTWHYTGHFVTAGEWTHVAVTFDGPAGEINTYVNGALVD
TCSQPGPMGDVYTAYNDLFIGGRENATTQRFQGQIDDVRIWGTTRSQAEIQATMNGPLTG
LEAGLAGNWRLNEGSGGIVVDGSTNGNNGVPGGMEGLAATPTYQGYITNEDTRLTIPAGS
GVLANDVDADGDSLSVTNLNTTRMRGTLILNAADGSFTYDPRGVFDSLRAGEHLVETFTY
TANDGSADSIPVTVSITVTGVNDAPVAVANSFTVGEGGTTNLNLAGNDSDADNGLDLTRI
TIVSGPANGTIDAINADGTVDYTHNGSETAVDSFTYTIDDGSGVVSNTVTVTLTITPQND
PPVVSAPASALSATEHVNLSIHGTGFGVTDADDAGSGGTATLRVGEGALTVSAGDSGVTI
DSGNDTATVVLSGTIARINNLLSGGGTGTISYLNSSGTPSASTTIIVTVNDQGSTGTDPG
TSGDGSSEEGRASQTINITAVNDPATVSSASQALTETDAALTASGTLTSTDVDNPDDAFT
ADTIVGTIGTCTIDSAGVWSFTANSAFDSLNVGDNVSETFTVTSIDGTASTVTVQINGTN
DVPAFDSAAITGATQDLPYSDTIATSDVDGDDLTISATTLPAWLTMVDNGDGTATLSGTP
SQAEIGNHDVELAVSDGFLAGTQRFSVQVAGTSEPDPDQDANSGSGQDFEDSDTDEEDGP
VIQDPSDQAPVDPQIEDDPVLPTDDNLTPDDSSDVANPSPGTPGPKAENPEKIIFLTDEN
DSGQRSESRRDDRAFTYFDNDLYKDIAAENYLPFNDQAAEHTPVNYELADMDGIDFADNA
WEQFVDNPDYDLLREEIDGTFRSEQEANALKTKIVTASMTTFTVGIVSYLLRAGSMVASM
MSTLPLWRGFDPIIILSGKKKDKKGKDEMAEGTEQRPETIFDSETE
NT seq
10041 nt
NT seq
+upstream
nt +downstream
nt
atgttaaccaaactcaccaacctgttcggccggcgcaacgccaggaagcatcctgaaacg
ctccgctacgaagagctggaaccgcgggtgctgttttccgccgaccttgcccccgggccg
gatacgctggctgttgaggaacaagtggtagccgcagaggtaaccgaagatacccccatc
gagaatcccgctgagacggaaacggccgagccgtcggctttgcaggcgggcctggagctg
gttttcgtcaacgataacgtagccgggtacgagcagttgattgccaacctgcagcaaagc
gacgacacgcggatcattgatgtcgtcaagctcgacgccgaccgcgacggcatcgggcag
gtcagcgatatcctgtccggctattccgacctggctgccgtgcatttcatcacctatggg
gccgacgggcagatccagttgggcagcacctggttggacggcaccggcctgaatcaaaac
agcgatgccgttgccggttggggcgacgctatgaccgacaccggggatatcctcttttac
ggctgcaatttcgccgccggcagtgatgggcagggcctgctgaacaccattggtgcactt
agcggtgctgatgttgccgcttcggacgacctcaccggccatgcctccttgggaggagac
tgggatttggaatccaaggtcggtgacgtggagaccggggtcattgtcaccgacattgcc
caggaccaatgggtgggtgctttggataccaccacgattaccgtgaccaatttcggtttc
gaacagcccaacaccgctaaacagaacgactgggaaagcgttcccggttggagcagcgat
tcggtggcttccgcttcgggcgtggaggccgtggctaccaccgagggaacctggcgagga
tacctatggagcaccgatccttccgtttggcagttgaccgaccatgacattcttgccggc
aagacctatgagctgaacgtcgattcaaaaatcagcagtgtggcgggcgaactgaccatg
cgcctttactacgacgacggcggcacaagaaccgagattgccagtcaaacgatcgacacc
ctggcaaccgacatcatgaacacctgcacgatctctttcgattcggatgatgtacccgcc
gccattgggcaaaaactcgggattgaattcgaaaatacggttggcacaagcgggtggatc
gggctggacaatgtgcagcttgcttattcggcagccaacaatgccccggtactgtctggc
gccaacaacctgacgaccatcgacgaagacgatttcaccaacagcggcaccctggtttcc
gatcttatcagcgaccaggtgaccgatgcagacagtggtgcgtccttgggcattgccgtg
atcgcggtcgacgacaccaacggcacctggcagtataccaccgatggcggcagcaactgg
tatgcctttggtacggtggacgatgctaacgctcgccttctcgccgccgatgccaatacc
tctgtccgttttgttcccgatgccgactggaacggcacagtgacaaatggcatcacattc
cacgcctgggaccagaccagcggaacagccggcggcacggccgatctcaccatgacctac
acggtgcgcgacgagttttcgacggcttcatacagcaacaatgacggttcggccagctgg
gcgtccagttggatcgagggtaatgatgacaatgtggccacgagcgggctagttcggatt
accggtgacgcactgcgtttagaaagtgacgtcatcgatgctggctcggagagcgcacaa
cgtgcagcggacttgtccacagcgacaaacgccaccctgactttcgactttgaaacaaat
ttaagtgttgatccctccgattcgatcgtgctcgagatttcggacaacggcggttcgagt
tggtccactctggagatcttcactggtatctccggcagaagtaccgggtcacgcagttac
gatatcagcgcctatgccacggccgacacccagatccgcctgcgaatcgatagcggctat
aggggctttgcagaatacttctttgtggataacgtccaggtcgaatacaccgttgtcatc
aatgttggcggcacgagcgccttcagcacggctactgccagcagcagcgtcaccgtcaat
tctgtcaacgacgcgcccgttcttctcaccggcagtgtcgacaacctgaccgtcaacgag
gattccggattgacctccctcggccttggaagcgtcacctatggccccggtgggggcggc
aacgaaagcagccaaaccctgagctacgcggtgaccgtcatcccgccgcccagctttggc
gatatttttcttgctgatggtaccacgcgcgtaacgaccggttcctataccctggcccag
attcagggcatgcagttcaaaccggctgacgagcagagcgggtcgtcagcctttcagttc
aacgtaaccgactcgggcggcaccaccaatggcggatcggacagcatatcccagttcatg
accattacggtggatggggtcaacgatgcgccgacgtttgacatgggcacctttgatatt
tcttcggcgaccgttgcagagtccttctcggtcgggggggaagacgggttgccgtatggc
ctgtcattcagcccggacgggtcaaccctgtttgtgctgggcaacagcagcgacgcaatt
tatgcctattccctgccggcgccgtttcagctggttgtggccggtatgtcggccacccat
acgcagacgctgtccattggaagtgaagaagccacacctttggatttcgcgttcaacaac
gatggcagcaaacttttcctgatcggcaatacggatgatgccgttgtcgagtattcgctt
tcggccgcattcgacctgacaacagcgacatacagtggggcattggaagagttcaacgtg
gcggcgcaaaccggttcaccgcaaacggtcactttcaatgatgacggcaccaaattactc
atctccaacagcaatgacggtgtgtttggatatgatctgtccgtagcattcgatgtctcc
acagcggcttactccggtgagacgacaaccctgtcgggtcccaccggcattcgcgatata
caattcaattcggatggtacaaaattatatgccgtcgattccggcctcgcaacaatcttt
gaatatgatttgagcattgcctttgatgtgtcgacggccgtttatgccggcgtcggtgag
gccctgaatgtcagcgctgctgcaacgaatccccgggcaatggccttcagtgatgatggg
tcacgtttgttcgttgcggacagtgatgccgaggccatcatcgcttatgacctggccacg
atgagttccttaaacggcaatgtatcttttaccgaaggcggggccgcagtggtgctggat
gtggatgcccatatcagcgacgccgagctcgacgccctcagcggtggcctcggcaactat
gcgggtgccagcctgacgctggttcgcaacggcggggcttcgtcggaggatgtgttcgcg
ttcaacgacggcaacggtattacccttagcggcggcaacctgagcaacgcttccgggatc
atcggcaccttcgacatcaccaccacaccgggtcagctggtcatcagcttctccgacgcg
gccgagatcccgacctctgcggacgtggacaaggtgctccagcagataacctatgccaac
agttccgatgtaccaccggtttcagtgcagatcgactggacctttactgatggtaacacg
ggcagtcagggaaccggcggggcgcagcaggcgacgggcagcaccgccgtcaccattact
gccgttgatggtcatgcaccggttgctgtcgatgatgcattcaccatctcagcaggtgta
ccgattaccgttgacccgcttgccaatgacagcgatgtggatggcgatatcctgaccgtc
acccagatcatcgataccaccaatggcaatgccgcaaccaatctggtcaattccggcgat
acggccacactcgcatctggtacggttatcgaactgcgcgccgatggccgcctcaaggta
actgcaaccagcgcgggcagtgaaagttttgactatgtggtgacagacgataaaggcaac
agcgatacgggaactgtcgatctgacagtgggcgatgaccaagcgacggcagaaacgatt
ggttttgttacgacttggaataccgaaaattccggtgcatctgataacactacgattacc
attccaattggctccggcgatacaaacttcatcgtttattggggggatggttcttcatca
acccacagcgcagggccggtcagtcacacctatggctcagcaggtgaatatacggtagcc
attgtgggtgacttgcctggtatcaacttcgacggcggcggtgatggggataagttaacg
tcgatcgagcaatggggcaacatcgcgtggcaggatcttgacgatgccttcgacggggcg
agtaatctcgttatcaatgcgacggatgcccccgatctatccggaataacagatctctct
gaaatgtttaagaacgcgaccagcatcaatacagatctgagcaattgggatacgtccact
attaccaatatgcagaatatgttctatggtgcctcatcgtttaatcagaacatcagcaca
tgggatacgtcaaatgtcactgatatgagtggcatgttctatggtgcttcatcctttaat
caagacatcggagggtgggacacctccagcgttacagatatggacttgctgtttcgtgac
gccagtgccttcaaccaggatattggcggctgggacacctcaaatgtcaccagcatggta
cagatgtttatggaggcaacgacctttaatgctgacatcagcggctggaatacctccaat
gtcacgactatggaatctatgttcgaaaacgcccaggcttttaatcagaccatcggcggc
tgggatacctccagtgtcacgactatgagtagaatttttgcgcttgctgattccttcaat
cagaatattggggcgtgggatacctccagtgtcaccgatatgcgggatatgttcttggat
gccgatgtatttaaccaggatattggggcgtgggatacttccagtgtcaccagtatgcat
ggcatgtttgcccgtgcctatgcctttaaccaggatattggcgcctgggatacctccaat
gttacgacgatgcagtctacattctgggctgccattgcttttaaccaggatattgggggg
tgggacacctctagtgttacgacgatgagaaatatgttccggtccgcctatgcctttgat
caggacattggcagctgggttgtcaataacgtaacggatatgaactacatgttgaggtct
tcaggtttgtcgatcgctaattatgatgcaaccttgatcggttgggcgagtcaagatgtg
cagaccggtgtgacgctgggcgcgaccggcctggaatacagtggaaacggtatcgcggcc
gtcaacaccttaaccactacttatggctggtccattatcggccacacgttgacgaacact
gcgccaacatacgatggcaccctcgatggcaatccaaactatgtcgaaaatggcgctgcg
gtggcgctggatgcagacatcaacatcagcgacgccgaactcgatgccttcaacggcggc
ctgggcaactatgccggttccagcctgaccctattgcgcaacggcggcgccagcagcgat
gatgtcttcagcttcaacgatggcaacggcattaccttgagcggcggcaacctgatcaag
aacagccaggttattgccagtttcgacgtcaccaccaccgccggagaagtggtgatcacc
tttaccgatgccaacgtcgaaattcccacctcggcagatgtggacaatattctgcgccag
gtcacctatgccaacagttccgatgcaccaccggcttcagtgcagatcgattggaccttt
accgatggcaacacaggcagtcagggcactggcggtgcgctgcaggctgtcggcagcacc
acggtgagcattacccccgtcaacgatccgccggtgattggcggagtcgataccggcagc
gtcaccgaggacgtggatccggacgcggatggcctgctggagagcggcgccgcccttacc
attgccgacccggataccggccaatccagcttcgtggccgaaaccgtctccggcgcctac
ggcagcctgaccatcgatgccgccggcaactggcgctacgcggcggacaacacccaggcc
gccatccagcagttggatgccggccagagcgtcaccgacaccctgaccgtgaccacggcc
gacggcaccacccagaccgtcaccatcaccatcagcggggccgaagattcgcctttcgtt
gccaatgtcattgccgaccagagtgcggccgaaggcgtcgctttcaacttcacttttgcg
gccgacacatacaatgatgtcgatgtgtcggacagcctgacatacacggccaccctggac
gacgactccgtccttcctgcctggctgggcttcgatgggaccacgcgcaccttttccggt
acaccggccggtacggatgtcggaacgatcagcgtcaaggtgacggcagacgacggaagc
agcgcggcttttgatatctttgacatcgtcgtcaatcccaataatgtgcccgtgatcggc
ggcctcgacaccggcagtgtcaccgaggacgtcgatcccgatgccgacagcctgctggag
gctgccggtgccctgaccatcgccgatgcggatgcgggcgaatccagcttcgttgccgaa
accatcaccggcgcctacggcgatctgaccatcgacgcggccggcaactggagttaccgt
gccgacaactcacaggcggccattcagcagctggatgccggcgaaagcgtcagcgacacc
ctgacggtgatcaccgccgacggatcgacccatgatgtcaccatcacaatcaacggcacc
gaagatgcgcccattgcccggcccgagggtgtttatcttaccttcgacggcgacgatttc
atccaggttgccgacgaccccagcctgcagatgaccgacaatgtcaccatggaggcctgg
atcaatcacagcggcagcggcacgggcacccagatcatcgtcaacaaggaaggggagtat
gagatgggggttgtcgccgatacgggtgagatcatccatgccatcgccgacgcctcatcg
aactggacatggcactataccggccacttcgtgacagcgggggaatggacccatgtcgcc
gtcaccttcgatggaccggccggcgagatcaatacctatgtcaacggcgcactggtggat
acctgcagccagcccggccccatgggtgatgtctatacagcatacaacgatctttttatc
ggtggtcgtgaaaatgctaccacccagcggtttcagggtcagatcgatgacgtccggatc
tgggggaccacccggtcccaggcagagatccaggcgaccatgaacgggcctttgacgggt
ctggaagccggtctggccggcaactggcggttaaacgaaggcagcgggggaatcgtcgtc
gacgggtcaaccaacggcaacaacggcgtccccggcggaatggaggggcttgctgccacc
ccgacctatcaaggctatatcacgaacgaagatacacggctcaccattcccgcagggtcg
ggggtgctggccaatgatgtcgatgccgatggtgattccctgtccgtgaccaacctgaat
accacgagaatgcggggaaccctgattttgaacgccgccgacggcagctttacctatgac
ccgcgcggtgtattcgattcgctgcgcgccggcgagcatctggtcgagaccttcacctac
acggccaacgacggttccgccgacagcatcccggtcacggtgagcatcaccgtaacgggg
gtcaacgatgcaccggtggcagtggccaacagtttcacggtgggtgagggtggcaccacc
aacctgaacctggccggcaacgacagcgatgccgacaacggcctggacctgacgcgtatc
accatcgtctccggtcccgccaatggcaccatcgacgccatcaacgccgacggcaccgtc
gattatacccacaatggcagtgaaacggcggtcgacagctttacctacacgatcgatgat
ggcagtggtgtggtttccaacacggtcaccgttacattgaccatcacgccccaaaatgac
ccgccggtggtcagcgccccggcaagcgcgctgagcgccaccgaacatgtcaacctgtcc
attcacggaacaggcttcggcgtcaccgacgccgatgacgccggcagcggtggtacggcc
acacttagggttggcgagggcgccctgaccgtttcagcaggtgattcgggcgtgaccatc
gacagcggtaacgacacggcaacggttgtgctcagcggtaccattgcccggatcaacaac
ctgctctccggcggcggtaccggcaccatctcctatctgaacagcagcggcaccccctcg
gcctcgaccaccatcattgtgacggtcaacgaccagggtagcaccggcaccgatccgggg
accagcggcgacggcagttcagaagaaggccgcgccagccagaccatcaatatcacggcg
gtcaatgaccccgccacggtcagcagcgccagtcaggccctgaccgagaccgatgcggcg
cttactgccagcggaaccctcaccagcacggacgtggataacccggacgatgcctttacg
gccgacaccattgtgggcaccatcggtacttgcaccatcgattcggccggggtctggtcc
tttaccgccaacagcgccttcgacagcctgaacgtcggggacaacgtcagcgagacattc
accgtcaccagtattgacggcaccgccagcacggtcacggttcagatcaacggcaccaac
gatgtgccagcctttgattcagccgcgattaccggcgccacccaggacctgccatacagc
gacacaattgcaaccagcgatgtggacggcgacgacctgaccatcagcgccaccaccctg
ccggcctggctgaccatggtggacaacggagacggtaccgccaccctgtcgggtactccg
tcccaggcggagatcggcaatcacgacgtggagctggccgtctccgacggctttctcgcc
ggtacgcagcgtttttccgtccaggtggccggcacgagtgagccagacccagaccaggac
gccaacagtggttccgggcaggatttcgaagattccgacacagatgaagaagatggcccg
gtcatccaggatccgtcagaccaggcgcctgtcgatccccagattgaagatgatccggtt
ttgccgactgacgacaatttgacgcccgatgattcttcagacgtggccaatccgtcgccg
ggaacgccgggtccgaaagctgaaaacccggagaaaattattttcctgaccgatgaaaac
gattcgggccaacggtctgaaagccgcagggacgatcgtgccttcacctatttcgacaac
gatctgtacaaagatatcgctgctgaaaattatttgcctttcaatgaccaggcggctgaa
cataccccggtgaactatgaactggcagatatggacggcatagattttgctgataacgct
tgggagcagtttgttgacaatccggattacgatctgctgcgagaggaaatcgacgggaca
ttcagatcggagcaagaggccaatgcgttaaaaacgaaaatcgtcaccgcatccatgacg
accttcaccgtcggtatcgtcagttacctgttgcgggccggatccatggttgccagcatg
atgtcgacactgccgctctggcgcggctttgacccgattatcattctgtccgggaagaaa
aaagataaaaaaggcaaggatgagatggccgagggcacggaacagcgaccggaaaccatt
ttcgacagcgaaacggaatga
DBGET
integrated database retrieval system