Desulfosarcina alkanivorans: DSCA_50110
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Entry
DSCA_50110 CDS
T06544
Name
(GenBank) ABC di/peptide transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dalk
Desulfosarcina alkanivorans
Pathway
dalk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSCA_50110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dalk02000
]
DSCA_50110
Transporters [BR:
dalk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DSCA_50110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
BBO71081
UniProt:
A0A5K7YVJ9
LinkDB
All DBs
Position
complement(5653063..5654619)
Genome browser
AA seq
518 aa
AA seq
DB search
MKKKVPLCLLRLCIVLLAVLLVNTSSLFAMTPQSGGTLRLSMNVDIKSLDPHQIGWQNHE
VLRQVFEGILAVDDGFGIIPGLAHKWEVSDDGLAYTFHMRKGVKFHNGKEMTADDVKATL
DRLTVSSIKSKFETIARTEVTGPYRVTVTLSKPTATFLINLASPYTVGVMPKEEIERQGD
NIQHPVGTGPFAFVEWIPDRHVKLKRFADYWGGEGEATGTGGKKTAYADEVIFRPMTERA
VRVSALEAGDLDLVAIPSAERQRLSTNPNLVIAGTGPTFEFWNFWFNCKAGSPFADLNLR
KAFAHAVNKQEMLLATTGGTGVVVNSPFPNYSFWYTKAHAPEAGPGYDPALAKAYLKKSA
YKGETIKIITSKGYPAMDKQAVMAQAHLKQVGINTELEYHDWSSLFEKYKSGDFDVVSYG
YGSHADPDFFYYARMLSTNTFNGWGSPELDRLAEAARSTTDLEKRKALYDQAQQIINAEL
PLLFTFSEEYFYGYGKKLHGFKPWGAFFLRIWDVWIEK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaaagtgccattgtgtctgttgcgtttatgcattgtcctactggcggtttta
cttgtcaacacctcttcccttttcgccatgacgccccaatcgggcggcacccttcggctg
agcatgaatgtggacatcaagagcctcgacccgcatcagatcggctggcagaatcatgaa
gtgctgcgccaggtgttcgaaggcatcctggccgtggacgacggcttcggcatcattccc
ggcctggcccacaaatgggaggtatcggacgacggcctggcctacaccttccatatgaga
aaaggggtcaagttccacaacggcaaggagatgaccgccgacgatgtcaaggcgaccctg
gaccggctgacggtttcaagcatcaaaagcaagttcgaaaccatcgccagaacagaggtc
accggtccctatcgggtcaccgtgaccctttccaaaccgacggccacgttcctgatcaac
ctggccagcccctacaccgtcggcgtgatgcccaaagaggagatcgagcggcagggcgac
aatattcagcacccggtgggcaccggtcccttcgcctttgtggaatggattccggaccgg
cacgtcaaactgaagcgctttgcagactactggggcggcgagggtgaagccacgggtacc
ggcggcaaaaagaccgcctatgcggacgaggtgatcttccgccccatgaccgaacgggcc
gtgcgcgtgtctgccctggaggccggagacctcgacctcgtggccattcccagcgccgag
cgccagcggctctccaccaacccgaacctggtgatcgccggaaccggccccaccttcgag
ttctggaatttctggttcaactgcaaggcgggctcgccctttgccgacctgaacctgcgc
aaggcctttgcccacgcggtcaacaagcaggaaatgctgctggccaccaccggcgggacc
ggcgtggtcgtcaattcccccttccccaattattccttctggtacaccaaggcccacgct
ccggaagccgggcccgggtacgacccggcattggccaaggcgtacctgaagaaaagcgcc
tacaaaggcgagaccatcaagatcatcaccagcaaggggtatccggccatggacaaacag
gccgtgatggcccaggcccatttaaaacaggtgggcatcaacaccgagttggagtaccat
gactggtcctccctctttgaaaagtacaaatcgggcgatttcgacgtggtctcctacggt
tacggatcccatgccgacccggattttttctactatgcccgcatgctcagcacaaacacc
ttcaacggttggggcagccccgaactggaccggctggccgaagcagcccgatccacgacg
gacctggaaaaacgcaaggcactttatgaccaggcccagcagatcatcaacgccgagttg
ccgctgctctttaccttctccgaggagtacttctacggatacggcaagaagctccatggg
ttcaagccgtggggcgctttttttctgcgaatctgggacgtctggatcgaaaaatga
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