Desulfosarcina alkanivorans: DSCA_52950
Help
Entry
DSCA_52950 CDS
T06544
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
dalk
Desulfosarcina alkanivorans
Pathway
dalk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSCA_52950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
PD40
Motif
Other DBs
NCBI-ProteinID:
BBO71365
UniProt:
A0A5K7YSJ4
LinkDB
All DBs
Position
5978154..5984162
Genome browser
AA seq
2002 aa
AA seq
DB search
MQNAVSRTLIVVFGLLLLLGPPQLALANEASELLVTQGRGQLFNSGDMTVSGILQSRDTF
ALAVAADGEDQEAQAFYGFTHALAFMFEDGTTAGIDNLGELLEAFGVTRTANDGIDLDLF
NDLPLHDNDYDPPQTLPDGADVRAFVQGPLLTRLDEVLTALDSVRVGFSASVSAAETGDE
PLAIDDADIQVVRSWVHAARTFALIISAFDLSCDLNDIVQLLNADMLQFQRDLLDRYPTL
LQLRPEDGAGAENLTDAEQALRSAIDNYHGAHDFIVERIETDGDWRADHLFYFDSLAEAN
ASAFYVFQLEEIRTSLDEGRAARLESSEQNWLLTEVLEGGGSGQSISMDLEMDAESNVAY
GEWHGPSDHSFIWDHGQVQDVDIDGTTVTILLSVGDDGSCGDVTFTGTIGEDGASIIDGT
YSGSICSEPVEGDFTGTLVEEDTLTDVVDATRIFGTGSATPLDIRAVLPDFNAFNEPVIG
TFPGNPILNGILPTEPQIISNDDATRQFELMPGGPFDIPTAAIAIDGSFSDWPETAKVFD
DISQDDPEKNYDGNEDLKSFWMAQDDTYYYFRTVYYDGAASSGASPYIFFAANEHPQRDY
WNSQPPTCHVYPNPDGGGAIYAGKYSFNDYYGAENIEVGTDGADACVEWRVPKTDFGDLS
GRFIELQTGYDDYNRTFVQFPGYSVTGTVDLDGYNGGKIILYLYNGEDPDYSMLIGSAVI
DGPGAFSIDGMANMEYSTCYLYALWDRDGNGIVSYDDMFGVTEFLINDDVVVSGPDLSVD
QTIDFSVEGGVWNVHQPDGSFATYLDVYVNNFDHGILPEDIDNIEIEGPGGVVATLDHPD
MEIILYENNECEFFLSIPGQPEPGEYTFTVTSGSAVRVSTDFQYVIQTIPAPDTAAFSPA
EGAVVAGKTPIFTWEPVDMPGVPLYYRFEVVDDTTGQRVWASDRSMGMTDITLWEGLLAP
GGSYRWRVRVTDSGNWLAVQNRANSAWVHFTVPTELDAHDALPAIHPNEWNGLSWIGGDA
FACSVKVVDLDGVAVNGSSHTLMVTPPEGNTFPDGTDVKYASFDGAAGPTACYFWLHVGG
GIPVSGEYTFTVTDPEDHSVSFVEQVDVNPLDGPDEASLTPSNIDHFITAVFDDVYVNGQ
PYEDFDLTDISQLDSSRWKGVSEAAIVDNKLMISLEEFVGRAHGGISFADIEPITSVAAD
VTVIDISDNRAKARIAGAFFNDGSNADFWFSISNDGTRVYYSVSKQWFNGQGNYQWEDVQ
SGDLVAAALNDVVTVGVSWNEGAKTLSFSATNQTQGLTHSEDYVHVGPVYPPINKELNLQ
ARINLTTNTTPTFTWDPVANASRYRVRIFTYDNSQTVWKGYTGTETSVTVPPGVLEPDSY
YRYRVEAWDKPSPLGIDNFGRTPISSSDYYRFYTNSEVPETPYIDLDGGGVQTVQSDEPG
VIPTFWVRVNDRQGVPGNIASVKVRFPITGHEEFLYLDHTDGPYRGYYHTVSEQPLEAGT
YTFTVTDEEGHTATVSDDLVISPIGYPLADSLTATVGPDDIQVSWGAVDGAGFYRLEIYN
EAYQRIHRFAVDAADGPSFAIPRGLLEDGRLYRYRIKTYREFYSDITGDDTEGNNDNSSQ
IPWRSSQYPTFMLSPITGGAGTPDIDMDNQGVYVSHAYDPVLGQDAYVLAFLVKVTDADG
VPGNIDRVYATLPDDRQVDLTFDESLSDTQGYYYADLRFTDIDEIVLLEGDYTFTVADRD
NPPVTSSPDSLSGVAANMLATPANLSPAADALLDSTTPTLSWDAVAGADYYRVRIFTSWH
STLYRSDYLASTATSWEVPYGVLAPHTTYAYRVYAYRGNYPAEDLDFSAFNLLYYSWHPH
FTVSGDPDSDADGLSDTLEASMCTQPDDADSDDDGILDGIEYAGETNPCNADSDDDGIQD
GTESGLTDADIGPDTDPGVFVADADPYTVTDPTLADSDGDGTDDGDEDTNHNGRVDAGES
DPNEIEELAKPLPFIPLLLLGD
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgccgttagtcgaaccctgattgttgtttttggtctcctgcttcttctcggt
cccccccagttggctttggccaacgaggcctccgaactcctggtgacccagggcaggggg
cagttgttcaacagcggcgacatgaccgtttccggcatcctgcagtcccgggacaccttt
gcccttgcggtcgccgcagacggcgaagatcaggaagcccaggccttttacgggttcacc
cacgccctggcctttatgttcgaagacggcaccaccgcagggatcgacaatctgggcgag
ttgctggaggccttcggcgttacgcgcacggccaacgacgggatcgacctggatctcttc
aacgacctgcccctgcatgacaatgactacgacccgccgcagaccctgccggacggggcg
gacgtgcgggcttttgtacagggccccctgctgacccggctcgacgaggtgctcaccgcc
ctcgactccgtccgggtcgggttcagcgcctccgtctcggcggcggaaaccggagatgag
ccgctggccatcgacgatgcggacatccaggtggttcgctcctgggtccatgccgcccgc
actttcgcactgatcatcagcgcctttgacctgtcgtgcgacctgaacgacatcgttcag
ctgctcaacgccgatatgcttcagtttcagcgcgacctgctggaccgctatccgaccctg
ctgcagcttcgcccggaagatggtgccggggcagagaacctcaccgacgccgagcaggcg
cttcgaagcgcgatcgacaactaccacggggcccacgattttatcgtcgagcgcatcgaa
actgatggcgactggcgggccgaccacctgttttacttcgacagccttgccgaggccaat
gcctccgccttctacgttttccagctggaggaaatccggacgtcgctggacgaggggcgt
gcggcccgcctggaatcgtcggagcaaaactggctgctgaccgaggtcctggaagggggg
ggcagcggccagtcgatctccatggacctggaaatggacgcggaaagcaacgttgcctac
ggcgaatggcacggcccctcggaccacagttttatctgggatcacggccaggtccaggat
gtcgatatcgatggcacaacggtcaccatcctgctcagcgtcggcgacgatggctcctgc
ggagacgtgacctttacggggacgatcggcgaagacggggcctccatcattgatggaacc
tactccggcagcatctgctccgagccggtcgagggcgatttcaccggcaccctggtggag
gaggacaccctgaccgacgtggtcgatgccacccggattttcggcaccggttcggccacc
cccctggatatccgtgccgtgctgcccgacttcaatgccttcaacgagccggtcatcggc
acgtttcccggcaatccgatcctcaacggcattttgcccaccgaaccccagatcatcagc
aacgacgatgccacccgccagttcgagttgatgcccggcggcccgttcgacatccccacg
gccgccatcgccattgacgggagtttcagcgactggccggaaacggcaaaggttttcgac
gacatcagccaggatgatccggaaaaaaactacgatggaaacgaggacctgaagtccttc
tggatggcccaggatgacacctactactattttcgcacggtttattacgacggcgcggca
tcctcgggcgcatcgccctatatctttttcgccgccaacgaacatccccagagagattac
tggaacagccagccgcccacctgccacgtctacccgaatcccgacggcggtggggcgatc
tatgcagggaaatatagcttcaacgactactacggcgccgagaatatcgaggttggcacc
gacggcgcggatgcctgcgtcgagtggcgggttcccaaaacggatttcggggacctgagc
ggtcgtttcatcgaactgcaaaccggctatgacgattacaaccgcacttttgtgcagttc
ccgggctactctgtcacgggtacggtggacctcgacggctacaacgggggtaagattatt
ctttatctctacaacggagaggatcccgattacagcatgctgatcggcagtgctgtcatc
gatgggccgggagcattcagtatcgacggcatggccaacatggagtactcgacctgctat
ctgtacgccctctgggaccgggacggcaacggaattgtcagctacgacgacatgttcggc
gttaccgagtttttgatcaacgatgatgtggttgtatcgggtccagatctttcggtcgac
cagaccatcgatttcagcgttgaaggcggtgtctggaacgtacaccagcctgacggctca
tttgcgacctacctggatgtctacgtcaacaattttgaccacggcattcttccggaggat
atcgacaatatcgagatcgaaggtcccggcggcgttgtcgccaccctggaccatccggat
atggaaatcattctctatgaaaacaacgagtgcgaatttttcctctccatccccgggcag
ccggagccgggagaatatacctttacggtgaccagcggcagtgccgtccgggtgagcacc
gacttccagtacgtgatccagaccatcccggcacccgatacggctgccttttcacctgcc
gagggtgccgtggtggccggcaagacgcccattttcacatgggaaccggtagacatgccc
ggcgtgcccctgtactaccgtttcgaagtggtggatgacaccaccggacagcgcgtgtgg
gccagcgaccgcagcatggggatgacggacatcaccttgtgggaaggcctgctggcgccg
ggcggcagctatcgctggcgcgtgcgggtgaccgacagcggcaactggttggcggtgcag
aaccgggccaacagtgcctgggtgcattttaccgtgcccacggaactggacgcccacgac
gccctgccggccattcatcccaacgaatggaacggcctgtcctggatcggcggggatgcc
tttgcctgctcggtgaaggtggtcgacctggacggggttgccgttaacggttcctctcac
acattgatggttactcctcccgaagggaacaccttccctgacggcaccgatgtaaaatac
gcgagcttcgacggcgccgccggaccgaccgcctgttacttctggctgcacgtgggtggc
ggcatcccggtttcgggtgaatacactttcacggtgaccgatcccgaggaccactcggtc
agcttcgtcgagcaggtggatgtcaatccgctggacgggccggacgaagcctcgctgacg
cccagcaacatcgaccatttcatcactgctgtttttgacgatgtttatgtgaacggccaa
ccttacgaagacttcgatctgaccgatatctcccagctggattcctcccggtggaagggg
gtcagcgaagctgcgatcgtcgacaataagctgatgatcagccttgaggagtttgtcgga
cgcgcccacggcgggatcagctttgccgacatcgaaccgatcacctcggtggcggcggac
gtcaccgtcatcgacataagcgacaaccgcgcaaaagcccggatcgccggcgccttcttt
aatgacggcagcaacgccgacttctggttttcgatttccaacgacggcacacgtgtttac
tacagcgtttccaaacaatggttcaacggtcagggtaactatcagtgggaagatgtccag
agtggcgaccttgtggcagccgccctgaacgatgtggtcacggtgggggtctcctggaat
gaaggcgccaagacgctgtccttcagcgccaccaaccagacccagggcctgacccactcg
gaagattacgttcacgtcgggcctgtatatccgcccatcaataaagagttgaatcttcag
gcccgcatcaacctgaccacgaacacaacaccgacctttacctgggatccggtggccaac
gccagtcgctaccgggtgcgcatcttcacctacgacaacagccagacggtctggaagggc
tacaccggcactgaaaccagcgttaccgtaccgccgggcgtgctggagcccgattcttac
taccgctaccgggtggaagcctgggataagcccagcccgctgggcattgacaacttcggc
cgcaccccgatctccagcagtgattactaccgtttctacaccaacagcgaagttcctgaa
acgccgtatatcgatctggatggcggcggggtgcaaaccgtgcaatccgacgagcccggg
gtcattccgaccttctgggtccgggtgaacgaccgccagggcgtgcccgggaatatcgcc
tcggtgaaggtgcggttcccaatcaccgggcacgaggagtttttatatctggatcatacc
gacgggccctaccggggctattatcataccgtttcggaacagccgctcgaagccggcacc
tacacctttaccgtgaccgacgaagagggccatacggccaccgttagcgacgatctggtc
atcagccccattggctacccgctggccgacagcctgacggccaccgtggggcccgatgat
atccaggtcagctggggtgccgtcgacggtgccggcttttaccgcctcgagatctacaac
gaagcctaccagcgaatccaccgttttgccgtggatgccgcagacggcccatcctttgcc
attccgcgcggcctgctcgaagatggccgcttgtaccgttaccggatcaaaacctatcgc
gaattttacagcgacatcacaggagacgacacggaaggcaataacgacaacagttcacag
atcccctggcggagcagccagtatccgacgttcatgctctctccgatcaccggaggtgcg
ggtacccctgatatcgatatggataaccagggggtgtacgtctcccacgcctacgatccg
gtgctgggacaggacgcctatgttctggcctttctggtcaaggtcaccgacgccgacggc
gtgccgggcaacatcgaccgggtgtatgcgaccctgccggatgacaggcaggtcgatctg
accttcgatgaaagcctgagcgatacccaaggctattactacgccgacctgcgtttcacc
gacattgacgaaatcgtgctcctggaaggcgattacacctttacggtggcggaccgcgac
aatccccctgtgacctcgagccccgatagcctgagcggggtggccgccaatatgctggcc
acgccggccaacctgtcgccggcggcggatgccctgctggacagcaccacaccgacccta
tcctgggatgcggttgccggtgccgactattaccgcgtaaggatctttaccagctggcac
agcaccctttacaggagcgactatcttgcctcaacggccaccagctgggaggtgccttac
ggggtgctggcgccgcacaccacatatgcctaccgggtttacgcctatcgcggcaactat
ccggccgaagacctggatttcagtgcctttaacctcctgtactacagctggcatcctcat
tttaccgtatcgggggatccggacagcgacgctgacggcctttcggacactctggaggcg
tccatgtgcacgcagcccgatgacgccgacagcgacgatgacggtatcctggatgggatc
gagtacgccggcgaaaccaacccctgcaacgcggacagcgacgacgacggcatccaggac
ggcaccgagagcggcctgaccgacgctgacatcgggccggacaccgacccgggtgttttt
gttgccgacgccgatccgtatacggtcaccgatcccaccctggcggactccgacggggac
ggcacggatgacggtgatgaggataccaaccacaacggccgggtcgatgcgggtgaaagc
gatcccaacgagatagaggaactcgcgaaaccgttgccgttcataccgttgctgctgctg
ggggattga
DBGET
integrated database retrieval system
