Desulfosarcina alkanivorans: DSCA_54490
Help
Entry
DSCA_54490 CDS
T06544
Name
(GenBank) 4Fe-4S ferredoxin
KO
K00125
formate dehydrogenase (coenzyme F420) beta subunit [EC:
1.17.98.3
1.8.98.6
]
Organism
dalk
Desulfosarcina alkanivorans
Pathway
dalk00680
Methane metabolism
dalk01100
Metabolic pathways
dalk01120
Microbial metabolism in diverse environments
dalk01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
DSCA_54490
Enzymes [BR:
dalk01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
DSCA_54490
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.3 formate dehydrogenase (coenzyme F420)
DSCA_54490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_8
Fer4_2
Fer4_9
Fer4
Fer4_6
Fer4_3
Fer4_4
Fer4_18
Fer4_7
FrhB_FdhB_N
Fer4_17
Fer4_10
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
BBO71519
UniProt:
A0A5K7YU29
LinkDB
All DBs
Position
complement(6143425..6144372)
Genome browser
AA seq
315 aa
AA seq
DB search
MLGYTEKMRDIAGRLLKECDVDMVIGFRKGTMPMMNEPCFVTKPEDVQSLVWDSNCGINL
ANYLTNRKEKIAIFAKGCDSRNIVTHIIENKIKRDQVHIVGVPCTGMIDKRKITGMVTGE
ILEVSETENTIKVKTADAETLLDKTEVLQQNCALCVHRNPVVHDEMVADPVEEQADVDRY
ADIRKIEAMGSEEKWQFFEDLLSPCIRCYACRNACPLCYCPTCFVDESKPQWVGKGQDPV
DVRTFHFLRAYHCAGRCTDCGACERACPVGINMRLLTRKLEMDCQEQFGWEAGLSLDQRP
ALDAYQANDPETFIK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttaggatacaccgaaaaaatgagggacatcgccggtcgccttcttaaagaatgtgac
gtggacatggtcatcggcttccgcaaaggaaccatgccgatgatgaacgaaccgtgcttt
gtcaccaaacccgaggatgtgcagtcgctggtgtgggacagcaactgcggcattaacctg
gcgaactacctgaccaaccgcaaggaaaagatcgccattttcgccaaaggctgcgattcg
cgtaacatcgtcacccacatcatcgaaaacaagatcaagcgcgatcaggtccacatcgtc
ggggtcccctgcaccggaatgatcgacaaacgcaagatcaccggcatggtcaccggtgag
atcctggaggtgtccgagaccgaaaacaccatcaaggtcaaaacggccgatgcggaaacg
cttctggacaaaaccgaggtgctgcagcagaactgcgccctgtgcgtccatcgcaacccg
gtggtccacgacgaaatggtggccgatccggttgaagagcaagcggacgttgaccgctac
gcggacattcgcaagatcgaggcgatgggcagcgaggaaaaatggcagttctttgaggac
ctgctctcaccgtgcatccgttgctacgcctgtcgcaacgcctgcccgctttgctactgc
cccacctgtttcgtggacgaatccaagccccagtgggtgggcaagggccaggaccctgtg
gacgtgcggaccttccatttccttcgggcctaccattgcgccggccggtgcaccgactgc
ggtgcctgcgaacgggcctgcccggtgggcatcaacatgcgcctgctcacgcgcaagctg
gaaatggactgccaggagcagttcggatgggaagccggcctttccctggatcagcgtccg
gcgctggatgcctaccaggccaatgatccggaaaccttcatcaagtaa
DBGET
integrated database retrieval system