Desulfosarcina alkanivorans: DSCA_55500
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Entry
DSCA_55500 CDS
T06544
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dalk03016
]
DSCA_55500 (truD)
Enzymes [BR:
dalk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DSCA_55500 (truD)
Transfer RNA biogenesis [BR:
dalk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSCA_55500 (truD)
Prokaryotic type
DSCA_55500 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BBO71620
UniProt:
A0A5K7YTJ5
LinkDB
All DBs
Position
complement(6263445..6264518)
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AA seq
357 aa
AA seq
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MTPNSDLTETADRVEAAITMMSPLPFAADPLPGIGGTIKAAPEHFVVEEVLPYAACGEGE
HVYVSFRRTGWNTADAARIMQKRLGLAPSDVGWGGRKDKTAVVVQTLSFRCGVKHPLSEV
KDALAGLPFDILAIDRHLNKIKTGHVAANRFTVVVSDPVSDALPRALAIADRLKQTGVPN
FYGPQRFGRDLQNIHRGFALFSPGKKRPRDTFMVSVVQSALFNIWLKKRMETGDYRRLLA
GDIVKKTDTGGMFIVDDPVIEGPRFAAGEIVYTGPIYGFKMKAALNAAGEREATFLDRFH
LTPDDFRRLRAPGSRREAILHMTDLEITEVDDGLCFSFTLPSGAYATTVLREFTRQV
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgaattcagaccttaccgaaacagccgatcgggtggaggccgccattaccatg
atgtcccccctgccctttgccgccgacccgctgccgggcatcggcggcaccatcaaggcg
gccccggagcactttgtggtcgaggaagtactgccttacgccgcctgcggtgaaggggag
catgtctacgtctctttccggcgaaccggctggaacactgccgatgccgcccgcatcatg
cagaaacgcctgggcctggcaccgtctgacgtgggctggggcggccgcaaggacaagacg
gcggtggtcgtgcagaccctctcctttcgctgcggtgtcaagcatcccctgtcagaagtg
aaggatgcgctggccggcctgcccttcgacattcttgccatcgaccgccatctcaacaag
atcaaaaccggccacgtggccgccaaccgcttcacggtcgtcgtcagcgaccccgtatcc
gatgcgctgccccgggcactggccattgccgaccggctcaagcagaccggcgtgcccaat
ttttacggtccccagcgattcggccgcgacctgcagaacatccacagggggtttgctctt
ttctcaccggggaaaaagagacccagggacacgttcatggtgtcggtggtccagtcggcg
ctgttcaacatctggcttaaaaaacgcatggaaaccggcgactaccggcggctgctggcc
ggagacatcgttaagaagaccgacacgggaggcatgttcattgtcgatgatccggtcatc
gaagggccacgattcgctgccggcgagattgtctacaccggacccatttacggattcaaa
atgaaagcggccctgaatgccgccggtgaacgggaggcgacgtttctcgatcggttccat
ctcaccccggacgatttccggcggctgcgcgcacccggatcgcgacgcgaagccatcctg
catatgacggacctggaaatcaccgaggtggacgacggtctttgtttttccttcacgctt
ccgtccggggcatacgccaccacggtcctgcgtgaattcaccaggcaggtatag
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