Desulfosarcina alkanivorans: DSCA_59440
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Entry
DSCA_59440 CDS
T06544
Symbol
ihfB-1_3
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dalk03032
]
DSCA_59440 (ihfB-1_3)
03036 Chromosome and associated proteins [BR:
dalk03036
]
DSCA_59440 (ihfB-1_3)
03400 DNA repair and recombination proteins [BR:
dalk03400
]
DSCA_59440 (ihfB-1_3)
DNA replication proteins [BR:
dalk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSCA_59440 (ihfB-1_3)
Chromosome and associated proteins [BR:
dalk03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DSCA_59440 (ihfB-1_3)
DNA repair and recombination proteins [BR:
dalk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DSCA_59440 (ihfB-1_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BBO72014
UniProt:
A0A5K7Z0J9
LinkDB
All DBs
Position
complement(6700501..6700776)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKLELISALKTKADISKSEAAKVVQIFFDSMADAMADGERVEIRGLCSFFVKEYKSYTG
RNPKTGEKVTIKPKKLPFFKAGKELKERVDQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactggagctcatctccgctttgaagaccaaggctgacatatctaaatccgaa
gcggcaaaagtggtccagatcttttttgacagtatggccgatgccatggccgatggagaa
cgcgttgaaattcgcggcctatgcagcttctttgtgaaagaatacaaaagctatacgggc
aggaaccccaaaaccggtgaaaaggtcaccatcaaacccaaaaaacttccttttttcaaa
gcaggcaaagaactgaaggaacgggtggatcaataa
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