Desulfosarcina alkanivorans: DSCA_59480
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Entry
DSCA_59480 CDS
T06544
Symbol
yhaM
Name
(GenBank) HD family phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dalk03019
]
DSCA_59480 (yhaM)
Messenger RNA biogenesis [BR:
dalk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSCA_59480 (yhaM)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
tRNA_anti_2
HDOD
Cas3_HD
DUF4839
Motif
Other DBs
NCBI-ProteinID:
BBO72018
UniProt:
A0A5K7YTQ5
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All DBs
Position
6704822..6705790
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AA seq
322 aa
AA seq
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MTKRFVSELVAGSAIDEVFLLAQRNMAHKKDGNPFLNVTLSDRTGQVKGVVWDQVERIVA
AVAEGDFVHVRAQVSEYRGSLQVVVKDMVRVPPEQVDVDDFLEATTRDVGKMLARLKEMT
GRMKTPCLKALFDAFWADDAFVAAYVRAPAAKLMHHAYIGGLLEHTLSMAVLSEMIAGHY
SGVDRDLLLAGVILHDVGKTRELEYTRSIDYSDEGRLLSHIIIGLSMLDEKLKQVPDFPE
LQAQLLKHMIVSHHGTRAFGSPEPPKTIEAVLLNFIDEMDSRVNSIREYVAKDPSDGSWT
PYHRLLERHFYKGPRVSDSPEG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacgttttgtctctgagcttgtggccggcagcgccattgacgaggtgtttctg
ctggcccagcgcaacatggcccataaaaaggacggcaatccttttttgaatgtgaccctg
tcagaccgcaccggccaggtcaaaggggtggtgtgggaccaggtggagcgcatcgttgcg
gcagttgccgagggagacttcgtccatgttcgggcgcaggtgagcgaataccggggcagc
cttcaggtggtcgtcaaggacatggtccgggtgcctccggaacaggtggatgtcgacgat
ttcctggaggccacgacccgcgatgtgggcaagatgctggcgcggctcaaggagatgacc
ggccggatgaaaacgccctgtctgaaggccctgttcgatgcattctgggccgatgacgcg
ttcgtggccgcctacgtccgggcgcctgccgccaagctcatgcaccatgcttacatcggc
gggcttctggaacacaccctctccatggccgttttgtcggaaatgatagccggccactac
agcggtgtggaccgtgacctgctgctggccggggtgatcctccacgacgtgggcaagacc
cgggaactggaatacacccgcagcatcgactactccgatgaaggccgcctgctcagccac
atcatcatcggcctgtccatgctggatgaaaaactcaaacaggtaccggatttcccggag
cttcaggcgcaactgctcaagcacatgatcgtcagtcatcacggtacccgggcctttggc
tcccccgaaccgcccaagaccatcgaggcggtcctgctcaattttatcgacgagatggat
tcacgggtcaacagcatccgcgaatatgtggccaaagacccgtcggacggatcgtggacg
ccctatcatcgcctgctggagcgccatttttacaaggggcccagggtgagcgattcgccg
gaaggctga
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