Desulfosarcina alkanivorans: DSCA_63920
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Entry
DSCA_63920 CDS
T06544
Name
(GenBank) hypothetical protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dalk
Desulfosarcina alkanivorans
Brite
KEGG Orthology (KO) [BR:
dalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dalk03000
]
DSCA_63920
Transcription factors [BR:
dalk03000
]
Prokaryotic type
Helix-turn-helix
Other families
DSCA_63920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA_16
AAA
MCM
AAA_22
HTH_30
bpMoxR
HTH_psq
AAA_7
GAF_3
Xre-like-HTH
IstB_IS21
I-TevI_DNA-bd
Motif
Other DBs
NCBI-ProteinID:
BBO72462
UniProt:
A0A5K7YRM5
LinkDB
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Position
complement(7198316..7199854)
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AA seq
512 aa
AA seq
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MHWNPETRYKLLLKINNAAIEHTTRETLFKAVATELSKHFDYDRLSINLYNAKTQSIRYF
AAADGILLNGGPGQERRPIAKGAIVQMVVQSGQPVIIDDLTRYTDHSSIGAMVEAKLTST
MAFPLTLRGKILGTIHFSFKKKPRHISELTAVLAEVSNQIAIAVDNMRQYTQLKRINADL
IREKRYLLSHSNQPYQQDSFIYESACMVEIIGIVERVADTDATVLLTGETGTGKDYLARF
IHNLSPRKENLFVKTNCHALTPSLFESELFGHAKGAFTGALSDRAGRFELAQAGTVFLDE
IGELPVSLQAKLLHVLEDRRFERVGDSRPRDIDFRIISATNCDLAEKIDEGRFRKDLYYR
LNTISIRVPPLRERIEDIPILLNKLTIDEAQRVNRSAPRFTGGAIEVLSAYQWPGNIREL
KNFVKRMIIMRPGEAISAGIIRKELPVQAAAETPSCEFQNLAEAERCHIERALASCKGAV
GGPTGAAKLLGIPRSTLQYRLKKYGLVPSAYA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcactggaatccggaaacccgttataaactgttgctgaagatcaacaacgcggcaatc
gaacacacgacaagggaaaccctgttcaaggcggtcgccaccgaattgagcaaacatttc
gattatgatcgtctcagcatcaacctttacaatgccaaaacccagtccatccgttatttt
gccgccgcggacggcattctgctgaatgggggccccggtcaggagcgccgccccatcgcc
aaaggggccatcgtgcagatggtcgttcagtccggtcaacccgtgatcatcgatgacctg
acccggtataccgatcattcatccatcggcgccatggtcgaggccaaactgacatcgacc
atggcctttccgctgaccctcagggggaaaatcctcggaaccattcatttttcctttaaa
aagaaaccccggcacatctccgagttaaccgcggtcctcgctgaggtttccaaccagatt
gccatcgccgtggacaacatgcgccagtacacgcaactcaaacggatcaatgccgatctg
atacgcgaaaaaagatacctgttatcccattccaaccagccctaccagcaggacagcttc
atatacgagtccgcctgcatggtggaaatcataggtattgtcgagcgtgttgccgacacg
gatgccactgtgctgctcaccggcgagaccggcaccggaaaggattatctggcccgcttc
attcacaacctgagtccgcgaaaggaaaacctgttcgttaaaaccaactgccacgccctg
accccgtcacttttcgaaagtgaattgttcggacacgccaaaggggcatttaccggagca
ctcagcgaccgggccgggcgatttgaactggcccaggccggaaccgtttttctggacgaa
atcggcgaactgccggtcagcctgcaggccaagctgctgcatgtccttgaagatcgccga
ttcgaacgcgtcggtgacagccgcccacgcgacatcgactttcggattatttcggccacc
aactgtgatctggcagaaaaaatcgatgagggccggttccgtaaggacctctattatcgg
ctcaataccatcagcatccgcgtcccgcccctgagggagcggattgaagacattccgatc
ctgctcaacaaactgacaatcgatgaagcccagcgggtcaaccgctctgcccccaggttt
accggaggggccatcgaggtgctgagcgcctaccaatggccgggcaacatccgggaactg
aaaaacttcgtcaaacgcatgatcatcatgaggccgggcgaagccatcagcgccggcatc
attcggaaggaactgccggttcaggcagccgcggaaacaccgtcatgcgaattccagaat
ctggcagaggccgaacgatgccacatcgaacgggcactggcgtcctgcaaaggggccgtc
ggggggccgaccggcgccgccaagcttctgggcattccgcgttccaccctgcagtatcgc
ctgaaaaaatatggactggtcccgtctgcctatgcctga
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