Diachasma alloeum: 107036219
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Entry
107036219 CDS
T07663
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dam
Diachasma alloeum
Pathway
dam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107036219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107036219
03012 Translation factors [BR:
dam03012
]
107036219
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107036219
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107036219
Translation factors [BR:
dam03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107036219
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
HA2_C
AAA_19
AAA_22
nSTAND3
ATPase
ResIII
AAA_14
NACHT
NPHP3_N
AAA_16
NB-ARC
AAA_23
Zot
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
107036219
NCBI-ProteinID:
XP_015109498
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MSTFSKTDKLKGGDRGRKPSRGGHHGESNNRSDLRRLFRNHGAGGDSHRGPSPCSSHGGA
SSHSEHQSSSRGGRARGRGRGLRLRSYDTTRYGGRARVYGRRERYFHLDPMVQRSINSLL
SLSKTPYPRESDSNDPDSNDQEAADSEDKYSHIEDSKFKREFLDIVSGSFQENLLRSLSM
SCKLIQNDRLNKKLKDEQCKRESLDNYKEMQEFRAKLPSYKMKDEILDLIRGNQVVVISG
ETGCGKTTQVAQFILDDEIKQGRGSTTKIVCTQPRRISAISVAERVAAERAETLGRSVGY
QIRLERIVSRDYGSMLFCTTGLLLQYMRSDPALRDFSHIILDEIHERSTDSDLIITLLKQ
IIPKRPDLKVVLMSATLNSETFAHYYDDCPNIHIPGFIYPVEEFYLEDILVLLADFRFPS
SEGRNNLRKFLKSNEKSKTFTDFIEPTVKQMEAERSYPLRVINELKNWKSEDLNLELIEE
LLVWISASKGPGAILVFLPGMLDISNLNGRLLNAEQFPADKFHIYPLHSKLPTVDQKLIF
ETPIEGVRKIILATSIAETSITIEDVVYVVDCGRSKLTRFDLGSKLETLESEWECIANAK
QRKGRAGRVQPGEVYRLYTRVREQTFKQFPPPEILRTPLEQVILQVKMLQLGKAEVFLGR
LMDPPEDKAIHLALDLLRSLNALDSDENLTPLGYHLAKLPLDPRTGKMILLASFFSCVDP
VFGIAASLAFKEPFLCPLNKEEEAKKAKFNLGVDKYSDHIALAEALRQYERALRKRAAGD
FCHDNFLSRNTLKLLIDMKRQFAGHLHEMKFLESDNPKDASANRNSHNTAMVKAIICAAL
YPNVAIVDAEWRGPDGVLLNVKTSEDGPVRIHPRSINSKITQLPSPYVTYFLKQKSGAIF
LHDTTFVSEAALILAAPECTVRPQGQRSQIILGESLSFPCNQSTGRMIQRLREEMHKVLE
HKITHPGAIKWQTQEDRVIGAIIELVSETDFSRYCRSWDYRF
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacattttccaagacagataaattaaaagggggtgatcgaggccgcaagccctcc
cgaggtggccatcacggtgaatccaacaatcgttcagacctccggagactctttcgaaat
catggagcaggaggagattcacatcgtggaccctctccatgtagcagtcacggaggcgcc
agcagtcattcagagcaccagagctcctctcgaggcggtcgagctagaggtcgaggacgt
ggacttcggttgagaagctatgatactactcgatatggtggcagggctcgtgtttatgga
cgaagagaacgctacttccaccttgatccaatggtccagagaagcattaatagtctcttg
tcgctatcaaaaactccttacccccgggaatccgactcaaacgatccagactcaaacgac
caagaggctgctgactctgaggacaaatacagccacatcgaagattcgaaattcaaacga
gaattccttgatattgtttccggaagttttcaagagaatctgttgagatctttatcaatg
agctgcaagctcattcaaaatgatagattgaataaaaaattgaaagatgagcaatgtaag
agagaatccctcgacaactataaagaaatgcaagagtttcgtgcgaaattgccttcttac
aaaatgaaagatgaaatccttgatctcattcgtgggaatcaagttgtggtaatcagcgga
gagacaggctgcggaaaaacaacacaagtagctcaattcatcctcgatgacgagattaaa
caaggtagaggaagtacaacaaaaattgtctgcacacaaccacgaaggatctctgcaatt
tccgttgctgagagagtcgcagcagagcgtgcagagactctcggaagatcagtgggttat
caaatacgattggagaggatagtctccagggattatggtagcatgctcttctgcacaact
ggactgctccttcagtacatgaggagtgatcctgcattgcgtgatttctctcacataata
cttgacgaaattcatgaacgaagtacagacagcgatttaatcatcacacttttgaagcag
atcattccgaagagaccagaccttaaagttgtcttaatgagcgccactctaaactctgaa
acatttgctcattattacgacgattgtcctaatattcacatcccaggatttatttatcca
gtggaggagttttatctcgaggacatcctggtgctgctagcagattttcgattcccttca
tcagagggccgaaataatttaaggaaattccttaaatcgaatgagaagtctaagactttc
acggatttcatcgaacccactgtaaagcaaatggaggctgaaagatcataccctttgcgc
gtcattaatgaactcaaaaattggaaaagtgaagacttgaacctagaacttatagaagag
cttttggtgtggatttctgcttcgaaaggaccaggagccattcttgtctttctaccaggc
atgctggacatttcaaatctaaacggacggcttctaaatgcagagcaattccccgccgat
aaattccacatttatcctctacattcaaagctcccaacagttgatcagaaattgattttt
gagactcctattgagggcgtgaggaaaataatcctcgccacatcaattgctgagacgtct
atcacaatcgaagatgttgtttatgtcgtggattgtgggagaagtaaattaacgcgattc
gatcttggcagcaagcttgagactctcgaatctgagtgggaatgcattgcaaatgctaag
caacgaaagggtcgagctgggagagttcagcctggtgaagtttacagattatacaccaga
gttagagaacagacgttcaagcaattcccacccccagagatattaagaacccctctggag
caagtcatattacaagtgaaaatgctacaacttggaaaagccgaagttttcctgggaaga
ctcatggatcccccagaggataaggcaattcatctggcacttgatttattgagaagttta
aacgcccttgatagtgatgagaacttgactccactcggttatcatcttgcgaaactacct
ctggatcctcgaactgggaaaatgattttgttggcgtcctttttctcctgtgtggacccg
gtcttcgggatcgcagcgagtctagcattcaaggaacctttcctctgtcctcttaataag
gaggaagaggcgaagaaggcgaaattcaatcttggtgtggacaaatacagtgatcacatt
gctcttgcagaagctttgaggcaatacgagagagctttacgaaagagggcagctggagat
ttttgccatgataattttttatcgcggaatactctgaagttattgattgatatgaagaga
caatttgcgggccatctgcatgagatgaagtttctggagagtgacaacccgaaagacgca
agtgccaacagaaattcccacaacacggcgatggtcaaagcaattatttgcgcagcacta
tatccgaatgtggcgatcgtagacgcagaatggcgggggcctgacggggtcctgctaaat
gtgaaaacatctgaggatggacccgtgagaattcatcctcgcagtattaattcaaagata
acgcaattaccgtcgccatatgtgacgtacttcctgaaacaaaagtccggtgctattttc
ttacacgacacaacttttgttagtgaagcagcactgattttagcggcaccagagtgcacc
gtaagacctcaaggtcagagatctcagatcattttgggtgaatccttgtcatttccctgc
aaccagtcaacaggtaggatgattcagagactccgagaagaaatgcataaagtgctggag
cataaaatcactcatcctggggctatcaagtggcaaacgcaagaggatcgtgttatcgga
gccatcattgagcttgtgtctgagaccgatttcagtagatattgccgtagttgggactat
aggttttga
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