Diachasma alloeum: 107037121
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Entry
107037121 CDS
T07663
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dam
Diachasma alloeum
Pathway
dam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107037121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dam03041
]
107037121
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107037121
Spliceosome [BR:
dam03041
]
Complex A
U2 snRNP components
U2 related factors
107037121
Complex B
107037121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
107037121
NCBI-ProteinID:
XP_015110990
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MVRSGDKERHHRRRSRSRSRSRSPSPEKKRKRSRSRDRDREREKSTRHRDRRSRSRERDR
EPRRDRSERDRDRDRKRGDSKEKRVESSKSSRGKDRKRSRSRDKKDKEKVDNEDLPFDHT
KLDKEEEQKRLELEMQKRRERIERWRAERKKNELEATKKDGKSSILANLQLPMKKWSLED
DSDEETPLPVHLKDPKDGDEPKEEEEITAVVRPEEDEIDPLDAFMAEVQEEVRKVNKFEK
GKSNTNGSAGNPQSGGVVFVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLHETAAG
IANKQKRELAKVDHATTEYAPFRKSFYVEVPEIARMTGEEVEAYKEELEGIRVKGKGCPK
PIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLP
MFRHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGISEQI
AELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIMEN
VRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQKFYKL
LEILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTMIDFKAGR
TKILVATSVAARGLDVKQLVLVINYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITTEQER
YAGEIVRAYELAGAPVPEPLRILWDRYRAKQAAEGKKLHTGGGFSGKGFKFDESEAALAN
EKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPSTTSVTVPGQPVNSAT
DKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAAKLNTK
LNYQPREEDLVEGEGEPGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEAGLT
VRGTYIATGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQSSGAHTGSRG
RYKVL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggagtggagataaagaaaggcatcacagaagacgttcgaggtcccgctcccgc
tcgcgttcgccctctcccgagaaaaaacgcaagcgatcccgtagtagagatcgcgatcgc
gagcgtgagaagtccacccgccacagggatcggcgcagtcgttcccgcgaacgcgaccgt
gagccccgaagagatcgctccgaacgcgatcgcgaccgcgaccgaaagcgcggagacagt
aaagagaaacgcgttgaatcgtcgaaatcctctcggggaaaagaccgaaagcgatctcga
tctcgcgacaagaaggacaaagagaaagtcgataatgaagacttgcccttcgaccacacg
aaactggacaaagaggaagaacagaagcggcttgaactagaaatgcagaagcgacgcgag
aggatcgagagatggcgcgcggagcgcaagaagaatgagcttgaggccacgaagaaagac
ggtaagtcctccatcctggctaacctccagttgcccatgaagaagtggtctttggaggac
gacagcgacgaagagactcccctcccggtgcacctcaaagacccgaaggatggagatgaa
ccgaaggaagaagaagaaattactgcggtcgtcaggcctgaagaagacgagattgatccc
cttgacgcgttcatggctgaagttcaagaggaagtccgcaaggtcaataaattcgagaaa
ggtaagtcgaacaccaatggctccgcgggaaaccctcaaagcggtggagttgtcttcgta
acgggcgtcgcgaagaagaaagtccagaagcaaaagggagaactgatagagcagaatcag
gacggtcttgaatactcaagtgaggaggagggggagaaccttcatgagaccgcggccgga
atcgcgaacaaacaaaaacgcgaactcgcgaaggtggatcacgccacaacggaatacgcg
ccgttccgaaagtctttttacgtagaagttccggagatcgcgagaatgacgggggaggag
gttgaggcttacaaggaggaactcgaggggatcagggtcaaggggaagggttgcccgaag
ccgatcaaatcttgggcacaatgcggtgtgacgaagaaggaattggaagtccttaagaag
ctaggctatgaaaaaccgacgcctattcaatgtcaagcgattcccgctataatgtctggc
agagatctgatcggaatcgcgaaaactggaagtgggaagaccctcgcgtttctgttgccc
atgttcagacatattctggaccagccgccattggcggacggtgacggccctatcgcgttg
ataatgacaccgactcgcgaactctgtatgcagatcggaagggactccaagaagttcaca
aagtcgttgggtctcagtcatgtctgtgtgtacggaggcaccggcatctccgaacagatc
gcggagctcaaacgcggagctgaaataatcgtctgcacaccgggcaggatgatcgacatg
cttgcagctaactccggtagagttactaatttacgtagagtcacttacgtagttcttgac
gaagctgatcgaatgtttgatatggggtttgagccgcaagttatgcggatcatggaaaat
gttcgaccagatcgacagactgtcctgttctctgcgacctttcctcggcagatggaagca
ctagctcggaggatactcacgagaccggttgaggtccaggtcggggggagatcggtcgtc
tgcaaggacgtggagcaacacgtggttgtcttggaagaagaccagaagttctacaagttg
ttggagatcttggggcactatcaggataagggatcgacaatcatctttgtggacaagcag
gagaacgcggatacgttgttgaaggatttgatgaaggcttcgtactcctgcatgtctctt
catggaggcattgatcagtgcgacagagattcaacgatgattgatttcaaagctgggcgg
acgaagatccttgtggctacttcggtggctgcgagagggttagacgtcaagcagctggtg
ctcgtcatcaattacgattgtccgaatcattacgaggattacgttcatcgatgcggcagg
acgggaagagctggtaacaaggggtatgcttacaccttcatcacgaccgagcaggagcgg
tacgcgggggaaatcgtgagggcttatgagctcgctggtgctcccgttccagaacctctg
aggatcctttgggataggtacagggcgaaacaagcggcggaggggaagaagctccataca
ggcggaggattcagtggaaagggcttcaagttcgatgagtctgaggcagctcttgctaat
gagaagaagaagttccagaaggctgcgttgggacttcaggattctgatgatgaggatatc
gagaatgatattgatcagcagattgagagtatgctggcacctaagagaacagtgagggag
attgcgagaccttctaccactagtgtcactgttcctggacaaccggtgaacagtgccacg
gataagttggagttggcgaggagacttgcgtcgaagatcaacatcgcgaagaatctgggg
gccgaggccaagggggcgacccagcaagcggctgaggcgatactcaagggggctggacct
acgaatcttatcacagcgaagactgttgccgaacaactggcagccaaactcaacacaaaa
ttgaactaccaaccgagggaggaggacttggtcgagggtgagggtgagcctggcgaacaa
accttcaggaaatacgaggaagaattggagatcaatgacttcccacaacaagccaggtgg
cgtgtcactagtaaagaagcactagcccaaatttccgaatattcggaagcaggtctgaca
gtcaggggaacctacatcgccactggcaaagccccacctgaaggtgaacgcaaactttac
ctcgccattgagtccaccagcgaactagccgttagcaaagccaaagccgaggtgtctagg
ctcatcaaagaggaactcatcaaattacagtcctctggggcgcacactggctctaggggt
cgctacaaagttttgtaa
DBGET
integrated database retrieval system
