Diachasma alloeum: 107037235
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Entry
107037235 CDS
T07663
Name
(RefSeq) transcription factor Sox-2 isoform X2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
dam
Diachasma alloeum
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dam03000
]
107037235
Transcription factors [BR:
dam03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107037235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
DUF4471
Band_3_cyto
Motif
Other DBs
NCBI-GeneID:
107037235
NCBI-ProteinID:
XP_015111160
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MLTMETDLKGGSLHGQMPPHPHQGVSPMGHHTGVSPYGALGSIVHSPALSSGSPPNSGLA
LTLQHHHQAQQHHYASMQAVQQQQQQQSMHSLAQQQAASHHPHQQSQSQAPSQQSNQGQQ
HQAPNNNNSTNKNNNIDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLL
NETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKFPLGSGVGGVGGMLGVDQ
RQVSGGGGPQQSQLPRDVYQMPNGYMPNGYMMHDPTAYQQHAYGGHMGAAAAAAAAAAGY
PRYDMSHHMGGGSPSPINSYMNGYGGYGTTTVPGGSPSPYHQAQPGSQMSSHSPSGSSIK
SEPTSPASGGIHTPTPTGTSTASNQGVKREYMGQQGQQPQGDLRQMISMYLPQSGEQGVV
QHSAGVYSPGPSPDPLAQHHSVIPPLTHMTYRTTFAPFFYPYAQERLRALEL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgctaacgatggagacggacttgaagggcggcagcctgcacggccaaatgccgccgcac
ccacaccagggtgtctcccccatgggccatcacaccggtgtctcgccatacggtgcacta
ggctcaatcgtccacagtccagccctgtcgtcgggctcaccgcctaattctggtctggcc
ctgacccttcagcaccatcaccaggcgcaacagcaccactacgcatcgatgcaagcggtg
caacagcagcaacagcaacagagtatgcacagcttggcacagcaacaggctgcctcgcat
cacccccatcagcagtcgcagtcgcaagccccttcgcagcaatccaatcagggccagcag
caccaagcgcccaacaacaacaacagcaccaacaagaacaacaacatcgatcgcgttaag
agaccgatgaacgcctttatggtgtggtcgaggggtcagcgtcgcaagatggcccaggag
aacccgaaaatgcataattccgagatatcaaagcgtctgggggccgagtggaagctcctg
aacgagaccgagaagcgtccgttcatagacgaagccaagaggctgcgggccgtgcacatg
aaggagcacccggactacaagtacagacccaggaggaaaaccaagaccctcttgaagaag
gacaagttccccctgggctcgggcgtcggcggtgtcgggggtatgctgggggtggatcaa
cgccaagtcagcggaggcggtggtccacagcagagtcaactgcctcgcgatgtctatcag
atgcccaacggctacatgccaaatggctacatgatgcacgatcccacggcttatcagcag
cacgcctatgggggacatatgggagctgcggctgctgctgccgctgctgctgctggatat
cctcgctacgacatgagccatcacatgggcggcggcagcccaagccccatcaatagctac
atgaatggttatggggggtatggaaccactacggtacctgggggatcaccctcaccctat
catcaggcacaaccgggctcccagatgtccagtcacagtccaagtggtagcagcatcaag
tcggaaccaacgagtccagctagtggtggcatacacacaccaacgcccactggaacgagt
acagcgagcaatcagggggtgaagagggagtacatgggacagcagggacaacaaccgcag
ggggatttgagacagatgatctccatgtatctgccgcagagcggcgaacagggagttgta
caacactcggctggagtttactcccctggaccgtcacccgatccacttgcacagcatcat
tctgttataccaccgctcactcacatgacctatcggacgacgtttgccccatttttttat
ccatacgcgcaagaacgacttcgagcgctcgaactctag
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