Diachasma alloeum: 107037315
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Entry
107037315 CDS
T07663
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dam
Diachasma alloeum
Pathway
dam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107037315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dam03041
]
107037315
03009 Ribosome biogenesis [BR:
dam03009
]
107037315
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107037315
Spliceosome [BR:
dam03041
]
Complex A
U1 snRNP components
U1 related factors
107037315
Complex B
107037315
Ribosome biogenesis [BR:
dam03009
]
Eukaryotic type
Pre-60S particles
Helicases
107037315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Cas3-like_C_2
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-GeneID:
107037315
NCBI-ProteinID:
XP_015111293
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MYHHERDHGRGGRGGGNQRGPRDMKYEGKHDNHRFGGNRGGMRGKQPGSALKKLQWDVRS
LQPIKKDFYVEHPAVKHRSPEEVNKFRQANEITVMGKEVPNPIQHFEEGNFPPYVMQGIK
RQGYLHPTAIQAQGWPVALSGKDLVAIAQTGSGKTLGYILPAIVHLINQPRPGPGEGPVA
LILAPTRELAQQIQEVANYFGETASVRNTCIFGGAPKGPQAQDLERGVEICIATPGRLID
FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQILMWSATWPKEVRSLA
EDFLNNYTQLNIGSLSLSANHNIIQIVDVCQEFEKDFKLQRLLQEIGTEKENKTIIFVET
KRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFRSGRTPILVATDVAARGLDVDDV
KYVINFDFPSSSEDYIHRIGRTGRRRQTGTAYAFFTSQNMKHAGDLIEVLREAGQSINPR
LSEMAEMAKSGGFARGPKRFNSSANGAERPLKRPAPNDSRIQGNAIRPRPGPARGGMPYH
SNMKPYPPSNYPVKSAGGHNPGYGYNPQRNYMQSNNIQGYNGGANFYGNNSQY
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatcacgagagggatcatggacgaggaggacgaggcggggggaatcagagaggt
cctcgtgacatgaaatacgagggtaaacacgataatcacaggttcggggggaacagaggg
ggaatgagaggtaaacagcctggtagtgccttgaagaagttgcagtgggatgtcaggtct
ctccagcccatcaagaaggacttctatgtcgagcatccagcggtcaaacacaggtctccg
gaggaagtcaacaagtttcgtcaagcaaatgagatcactgtgatgggaaaagaagtgcca
aatcccattcagcattttgaggaagggaattttccaccgtacgtcatgcaggggataaaa
agacaggggtatcttcaccccacggccattcaggctcaaggatggcctgttgcactcagt
ggaaaagatcttgttgctattgctcagactggctcggggaaaacacttggatacatcctc
cctgcaattgttcacctgatcaaccaaccccggccaggtccaggggagggtccagtggcc
ctgatcctagcaccaacccgagagctggcgcaacagattcaagaagttgccaattacttc
ggtgagacggcatcagtcagaaacacttgtattttcggtggagctcccaaaggacctcag
gcccaagacctcgagcgtggggtggagatttgcattgcgaccccaggtcgtctgatagac
ttcctcgagaaaggcacgacaaatctccagcgatgcacttatctggtcctcgatgaagct
gacagaatgctggacatgggatttgagccccaaattcgcaagattatcgagcagattcgc
cctgatcgtcagattctcatgtggtctgccacgtggccaaaggaggttcgatcactggct
gaagactttctgaataattacacacagctgaacatcgggtcgttgtctctctcagctaat
cacaacatcattcagatcgtcgacgtctgtcaggaattcgagaaagacttcaaattacag
agactcctgcaggagattggaactgagaaggagaacaagaccattatattcgtcgagacc
aagagaaaagtcgacgatatcacgaggaatatcagacgcgatgggtggcaggcattgagt
atccatggggataagaatcaacaggagagggatcatgttttacaggagttcaggagtggg
aggacaccgattctggttgctactgatgttgctgctaggggtttagatgtcgatgacgtt
aaatacgtcatcaactttgatttcccatcgtcgtccgaggattacattcacagaattgga
aggactggacgtcgaagacagacaggaacagcatatgcattttttacgagtcagaatatg
aagcacgcaggtgatttgatcgaggtgctgagggaagctggacagagtatcaatccgaga
ctgagtgagatggctgagatggctaaatctggtggttttgcacgaggcccaaaacgtttc
aattcctccgcaaatggtgcagaacgtccattgaaacgtccagcccctaatgactccaga
atacaaggaaatgccattcgacctcgaccaggccctgctcgaggtggaatgccctaccac
tcaaacatgaaaccctatcctccatcaaactatccagtcaagtccgcgggtgggcacaat
cctggctatggctacaatccccagagaaattacatgcagagcaacaatatccagggttac
aacggaggagccaatttttatggaaataattcacaatattaa
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