Diachasma alloeum: 107037372
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Entry
107037372 CDS
T07663
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
dam
Diachasma alloeum
Pathway
dam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107037372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dam03041
]
107037372
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107037372
Spliceosome [BR:
dam03041
]
Complex C
Other components
Step II factors
107037372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
AAA_30
nSTAND_NTPase5
SLFN-g3_helicase
Sigma54_activ_2
ResIII
T2SSE
ABC_tran
AAA_16
Sigma54_activat
ATPase
NB-ARC
PhoH
ATPase_2
SRP54
AAA_7
TsaE
AAA_23
Motif
Other DBs
NCBI-GeneID:
107037372
NCBI-ProteinID:
XP_015111383
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MSDPPDLYRLEGSDRSQPGGLILSKKPSDHTFKKPLPSVFGLDKLAEKKRRESSQDAPSR
APRGPRPDHKDRSYRNPTEETPTHTGGVNRDAQRRLEDRLRQQRLDLQDRRNRRREGRAR
SRSRERSESSRSTPRFKDEPRTPHFRTRDPTSKSNWDDDDEEEPRKSSWDHPTPKAYGRD
HRDSMRSEFTPSYKYNPWNKDRKPSGGTPLVEGEDAELWEEEQQRLDREWYGLDDGEGHH
FDVSEEYTQKKEQELEAKRQKRVSAQQRQINKDNELWERNRMLTSGVVSSLEHDNDPDDE
GEARVHLLVHNVVPPFLDGRIVFTKQPEPVVPVRDPTSDMALVARKGSALVRAYREQKER
KRAQKKHWDLSGTHLGNIMGVKDKRKEDREAPAEETDFKAGQKYARHMASSENSDSRHRQ
ILAQRRSLPVFAVRQELMTIIRENSVVVIVGETGSGKTTQLTQYLHEDGYSRNGMVGCTQ
PRRVAAMSVAKRVSDEMASALGDKVGYAIRFEDCTSKETVIKYMTDGILLRESLREGDLE
RYSVIIMDEAHERSLSTDVLFGLLREVVARRHDLKLIVTSATMDSSKFSAFFGNAATFQI
PGRTFPVETIHAKNPVEDYVDAAVKQVLQIHLQPKSGDVLVFMPGQEDIEVTCEALKERL
GEIDSAPELLILPIYSQLPSDLQAKIFQKSEGGLRKCVVATNIAETSLTVDGIVFVVDSG
YCKLKVYNPRIGMDALQVYPVSRANADQRSGRAGRTGPGVCFRLYTRRQYLDELLLTGVP
EIQRTNLANTVLLLKSLGVQDLLAFHFMDPPPQDNILNSLYQLWILGALDNTGRLTPLGR
QMAEFPLDPPQCQMLIVASQLGCTAEILIIVSMLSVPSVFYRPKGREEDSDSAREKFQVP
ESDHLTFLHVYQQWKVNGYSSSWCNDHFIHAKAMRKVREVRQQLEEILKQQKLELTSCGN
DWDIVRKCICSAYFHQAARLKGIGEYVNCRTGMPCYLHPTSALFGMGFTPDYVVYHELVM
TAKEYMQCVTAVDGHWLAELGPMFFSVKETGSGQAKRRQAVQHLQEMEGQMKAAEEEMKA
RAKEQLEKEQASVRKKEILTPGIREPGTPAPYRKTPARLGL
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccccccggacctgtaccgcctggagggcagcgacagatcgcagcccgggggt
ctgatcctgtcgaagaagccgtcggaccacacattcaagaagcccctgccctcggtcttc
ggtctggacaagctagcggagaagaagcgccgcgagagttcccaggatgcgccgtcgagg
gcccccagaggaccgcgaccagaccacaaggaccgaagctaccgaaacccgacggaggag
acgccgacgcacacgggtggagtgaaccgggatgcgcagcgtcggctggaggaccgcctg
cgtcagcagcgcctggacctccaggaccgccgtaaccgccggcgcgaggggcgggcccga
agccggagccgcgagcgctcggagagctcccgctcgacgccgaggttcaaggacgagccg
cggacgccccatttccggacgcgagacccgacatccaagagcaactgggacgacgacgac
gaggaggagccgaggaagtccagctgggaccacccgacgccaaaggcctacggtcgtgat
caccgtgactccatgaggagcgagttcaccccctcctacaagtacaacccctggaacaag
gacagaaagccctcgggagggactccgctggtggagggggaggacgcggagctctgggag
gaggagcagcagaggctggaccgcgagtggtacggcctggacgacggggaggggcaccac
ttcgacgtctccgaggagtacacccagaagaaggagcaggagctggaggcgaagcgccag
aagcgggtgtcggcccagcagaggcagatcaacaaggacaacgagctctgggagaggaac
agaatgctgacgtccggagtcgtcagctcgctggagcacgacaacgacccggacgacgag
ggcgaggcgcgggtccacctcctggtgcacaacgtggtgccgccgttcctcgacgggagg
attgtcttcacaaagcagccggagccggtggttccggtccgcgatccgacgtcggacatg
gcgttggtcgcccggaaggggtcggccctggtgcgggcgtacagagagcagaaggagcgg
aaacgcgcgcagaagaagcactgggatctctcgggaacgcacctcgggaacataatgggg
gtcaaggacaagaggaaggaggacagggaggccccggcggaggagacggacttcaaggcc
gggcagaagtacgcgaggcacatggcatcgtccgagaactcggactcccggcaccggcag
atcctcgcccagcgcaggagtctcccggtcttcgcggtccgccaggagctcatgactatc
atccgggagaactcggtggtcgtcatcgtgggggagaccggcagcggcaagacgacgcag
ctgacgcagtacctccacgaggacggctacagcagaaacggaatggtcggttgcacccag
ccgaggagggtcgccgcaatgtcagtggcgaaacgcgtttccgacgagatggcgtccgcc
ctcggggacaaggtcggctacgccattcggtttgaagactgcacctccaaggagaccgtc
atcaagtacatgaccgacggtatcctcctgcgggagagcctgagggagggcgacctggag
aggtacagcgtcatcatcatggacgaggcgcacgagaggtccttgtcgacagacgtgtta
ttcggtttgctgagggaagttgtggcgcgccgccacgatctcaagctcatcgtcacctcg
gcgaccatggactcgagcaagttcagcgccttcttcggtaatgccgcgactttccagatc
ccggggaggacctttcccgtggagacgatccacgcgaagaaccccgtggaggactacgtt
gacgctgcggtgaagcaggtcttgcagattcacctgcagccaaagtccggggatgtcctg
gtgttcatgccgggtcaggaggacatcgaggtgacttgcgaggccctgaaggagagactc
ggggagatcgattcagccccggagctcctcatcctgccgatctactcgcagctgccctcc
gatctgcaggccaagatcttccagaagtccgaggggggattgaggaagtgcgtggtcgcc
acaaacatcgcggagacgtctctaactgtcgatgggatagtcttcgtcgtggactctggc
tactgcaagctcaaggtctacaaccccaggatcggcatggacgccctgcaggtgtatccg
gtgtcgagggccaatgctgatcagagaagtggaagggccgggaggacggggccaggggtt
tgcttcaggctctacaccaggaggcagtacctcgacgagttgttgctcactggagtcccc
gagatccagaggaccaacctcgccaataccgttctgctactgaagtctctgggggtgcag
gacctgctggccttccacttcatggaccctccgccgcaggacaacatcctcaattccctc
tatcagctctggattctaggggctctcgacaacaccgggagactcacgcccctaggcagg
cagatggcggagtttcctcttgatcctccccagtgccagatgctgatcgtggcgtcgcag
ctggggtgcacagcggagatcctcatcatcgtctccatgctgtcggtgccttcggtattt
tacaggccaaaaggcagggaggaggactctgactcagccagggagaagttccaggtgccc
gagtccgatcacctgacgtttctccacgtctaccagcagtggaaggtcaatgggtactcg
agctcctggtgcaacgatcacttcattcatgccaaggccatgaggaaggtgcgggaggtc
aggcagcagctggaggagattctcaaacagcagaagcttgaactcacgagctgtggaaat
gactgggacatcgtcaggaagtgcatctgctctgcctactttcatcaggctgccagactc
aagggcatcggggagtacgtcaattgcaggactggaatgccttgctatcttcatccgact
tcggcgcttttcggcatgggattcactcctgattacgtcgtttatcacgaactcgtgatg
actgctaaggagtacatgcagtgtgtcacggctgttgatgggcactggctggcggagctc
gggcccatgttcttcagtgtcaaggagacggggagtggacaggccaagaggcggcaggct
gtgcagcatctgcaggagatggagggacagatgaaggcggcggaggaggagatgaaggcg
agggccaaggagcagcttgagaaggaacaggcttctgtcaggaagaaagaaatattgacg
ccaggcatcagagagccggggactccagcaccttacaggaagactccggcgcggctagga
ctgtaa
DBGET
integrated database retrieval system
