Diachasma alloeum: 107037381
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Entry
107037381 CDS
T07663
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
dam
Diachasma alloeum
Pathway
dam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107037381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107037381
Enzymes [BR:
dam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
107037381
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107037381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
107037381
NCBI-ProteinID:
XP_015111396
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MNEILDENFRSYYSKIEDTFKNASFIAIDAEFSGIDSENVPKLTLFDTVQERYEKQRDNI
APFSAIQIGLTAFVRVRHENKYIAEPFRFYLLSRSLLHGTNQNFHWEKTSMNFLRIHNFD
WNKLVYGGISYLNGPEEAKMRHLLKTNDYMSNLGAFRTLEEENNLLRSIKNVSEWLKSSP
KSEKSLEINCDDFVQLCCLQRQLRKSFKSIWTEQKGQKIFAIKVDPETREILEERDQNLC
EEQLLEYTLGFTRVFQLLCDLKKPIVGHNLLLDLMFMYKQFHKDLPKSYERFKREIHELL
PVVYDTKLLSYEMRKILEPREEEGQGKKQKGDKGRSNVLGELYKYFKDGDGRLLSWNSPR
IEFPDGTTTDAEAYHDAGWDSYYTGFCFVKMAHIFASHPRGSSLNSRELTHIEMMASLKD
YVNCVNLIRADLSHLRLDGPDPPSRRPPWLNIRALHSRSINTDEILVALSSYDSCDVQPN
SSRSILVAAPNWRTARDILQHFQNSKDFQAAPYNLLKHSPAVKSLLWGTLVISGSMLALL
IHRAIQKPSVP
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaattctggatgaaaacttcaggagttattattcgaaaatagaggatactttt
aaaaatgcgtcgtttatagctattgacgctgaattctccgggattgacagtgaaaatgtt
ccaaagctcacattgtttgatacagtccaggagaggtacgagaagcagagagataacata
gcaccattcagtgctattcaaataggcctgacagcattcgtaagagtcagacacgagaat
aaatacatcgcagaacctttcagattctatttgctgtcgagatcgttactgcatggtact
aatcagaattttcactgggagaaaacgtcaatgaactttctgcgaatccataatttcgat
tggaataagttggtgtacggaggcatctcctacctgaacggcccagaggaggcgaaaatg
aggcacctcctgaagaccaacgactacatgagcaacctgggcgccttccgaacgctggag
gaggagaacaatctcctgcgctccataaaaaacgtgtcagaatggctaaagagctccccc
aagtccgagaaatccctggagatcaattgcgacgacttcgtgcagctgtgctgcctgcag
aggcagctgaggaagtccttcaagtccatctggaccgagcagaagggccagaagatcttc
gcgatcaaggttgaccccgaaacccgtgagatcctggaagagagggaccagaacctctgc
gaggagcagctcctggagtacaccctgggcttcactcgggtcttccagctgctgtgcgac
ctgaagaagcccattgtcgggcacaacctcctgctggacctcatgttcatgtacaaacag
tttcacaaggatttacctaagagttacgagaggtttaagagggagatccacgagctgctg
cctgtggtgtacgacactaagctgttgagctacgagatgaggaaaattttggagcccagg
gaggaggagggacaggggaagaagcagaaaggagataaaggaaggtccaacgtcctcgga
gagctgtacaaatacttcaaggatggagacggaagactgttatcttggaactctccaagg
attgaatttccggacggcacgacaaccgatgcagaggcatatcatgatgccggctgggac
tcgtactacacaggcttctgcttcgtgaaaatggctcacattttcgcatctcacccacga
ggaagctccctgaattctcgagaattgacccacatcgagatgatggcaagcctcaaggac
tacgtgaactgcgtgaacttgattcgagcggatctttctcatttgaggcttgatggacct
gatccaccgtcgaggaggcccccctggctgaacatcagagccctgcactcgagatcaatc
aacactgacgagattctcgtggccctatcgtcctacgactcctgcgacgttcaaccgaac
tcctcgagaagcatcctggtggcggcccccaactggcgcacggctagagacattctccag
cacttccagaacagcaaggacttccaggcggctccgtataatcttctgaagcactcccca
gcggtgaagtccctcctctgggggacattggtgatctctggaagtatgctggcactgctg
attcatcgggccattcagaagccgtctgttccgtag
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