Diachasma alloeum: 107037563
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Entry
107037563 CDS
T07663
Name
(RefSeq) collagen alpha-1(II) chain
KO
K19719
collagen type II alpha
Organism
dam
Diachasma alloeum
Pathway
dam04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107037563
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dam00536
]
107037563
Glycosaminoglycan binding proteins [BR:
dam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107037563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
107037563
NCBI-ProteinID:
XP_015111669
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MWERSGQIIGFFLILNVLLVDAGKTRRIRSRNSSQQQDQAPPVDYDEYYENYSDYEEIGN
DTTTAAVATTRTGHEDIGHERTTESPEITTVSSPVERMFNDTDSSSTEMVSGESNQINSI
AGIRGQQGRPGEDGQPGIAGAPGSPGMPGAPGLPGAVPDMSLYYQQLAMAQASDDKGPID
AASSLYNPLSYLQAPVGPAGPRGPQGPAGAPGLQGLQGPRGETGDPGLPGLPGPQGTRGL
PGFPGKDGEPGDDGETGQPGSQGLRGSRGLPGLPGIPGAKGHQGLPGLDGAKGEHGAAGD
KGDVGAPGPTGLPGPPGQAGPRGEKGREGAQGPPGVRGIDGANGQPGQSGPAGKIGSPGF
PGVPGMKGDQGFPGLKGSQGYPGQKGESGRNGEPGETGAEGLPGKDGIPGEKGIAGLPGL
VGVPGFPGARGLPGIPGTPGLMGAKGFPGIPGERGFRGDTGMKGDFGPPGPRGQPGPPGN
DGKRGKRGPRGPAGATGLPGTQGIAGERGLPGMPGPSGAPGPRGLRGLPGEMGAPGRPGV
EGKSGPPGLTGLQGPQGIPGEIGPEGPIGKTGPPGLSGRPGDKGPPGSVGFQGEPGNPGQ
PGSTGPMGPMGLTGDRGSKGEAGIRGADGPQGPKGRPGLPGNEGPKGDRGLEGQKGSKGH
RGLMGLQGLPGIPGAVGEKGIIGLPGVSGKDGIPGLRGPPGRDGNPGPIGLAGNPGPPGV
AGEDGRHGPPGPPGPVGPPGPPGEGNFGYDAASLAALMMQGQTKGPDSMVGDEPLRLFGK
EMTKDEQNKLLTRAYEHFKSIVQNAIEPDGDENSPARTCRDLFISHPDKPSGEYWIDPNG
GDVRDAIVVHCDVNKRATCIFASPSRTEEINHLGRHLGGGIWLSEIEDGMKISYKADSNQ
IGMLQLLSTHAEQNLTYHCKNSVAYYDEEHKTHRRGLKLLAWNDVELTPRGNQRLRYDAT
LDGCQTRANEWATTEITYTTDKPTRLPLVDIALRDIGKPEQRFWIEINSVCYR
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaacgaagtggccagattatcgggttttttctgattcttaacgtgttacttgtt
gatgccggaaaaacgaggcggatcaggtctaggaacagcagtcagcagcaagatcaggca
cctccggtagactacgacgaatattatgagaattattcagattacgaagaaattggaaac
gatacaacaactgccgctgttgcaacgacacgcacaggacatgaagatataggtcatgaa
agaacaactgaatccccggagataacaacagtttcatctccagttgaacgaatgtttaat
gacacagactcatcgtcaacggagatggtgtcgggggagagtaatcaaataaattcaatt
gccggaatacgtggtcaacaaggacgaccaggggaagatggtcagcctggtatcgcggga
gcacctggttctcctggaatgccaggtgccccaggactccccggagctgtacccgatatg
tctttatattaccaacaattggcgatggctcaggcgagtgatgataaaggcccgatcgac
gcagcctcatccctctataatccactgagttatttacaagcaccggtggggcctgccggc
ccgagaggaccgcaaggaccagctggtgcaccgggactacaaggtttacaaggccctcga
ggcgagacaggggatccaggtctaccaggtttaccgggccctcaaggaactaggggattg
cctggatttcctggaaaagatggtgaaccgggggatgacggtgaaacaggtcagccaggg
agtcaaggcctccggggttcgagggggttgccaggtttaccaggcattcctggagctaaa
ggccaccagggtttgccgggattggatggagccaagggcgagcatggcgccgctggtgac
aaaggcgacgtgggcgcgcctggaccgacagggctgccgggaccgccgggtcaagcaggg
ccaagaggtgagaaagggagggaaggggctcagggaccgcctggagttcgtgggattgac
ggcgcaaatggacaacccggtcaatcaggtcccgctggcaaaatcggttctccgggcttt
cctggagttcccggaatgaagggcgaccaggggttccctggcctcaaaggcagccaagga
tatccgggccaaaaaggtgagtcagggcgaaatggcgagcctggagaaacgggcgccgaa
ggtcttcctggaaaggatggcattccgggtgagaaaggaattgccggacttccgggatta
gtcggcgttccaggatttccaggggctagaggattgcccggtatacccggtactcccggg
ctgatgggcgctaaaggctttcctgggattcccggtgagagaggattcagaggggatact
gggatgaaaggagactttgggcctcccggaccgcgaggacaaccaggtccccccggaaat
gatggtaaacgtggcaagagaggcccacggggacctgcaggtgcgacaggactcccgggg
acacagggtattgccggggagcgcggattgccggggatgcctggtccatccggagcgcca
gggcctagaggactgcgcggcctgccgggagagatgggggcacctgggagacctggggta
gaaggaaaatctggtccccccggactcacaggattacagggaccgcaggggataccaggg
gaaatcggccccgaaggacccatcggaaagacgggaccgcctggtttgagtggtcgacct
ggtgacaaaggccctccaggttcggttggcttccaaggagagccgggaaacccgggacaa
ccgggttccactggaccaatgggtcccatgggtctcactggcgatcgagggtccaaagga
gaagctggtattcgcggtgcggatgggccacaaggaccgaaaggaagaccaggtctgcct
gggaatgagggacccaaaggtgatcgaggattggagggtcagaaaggttccaagggccac
cgcgggctgatgggactccaaggtttacctggaataccgggtgctgttggggagaaagga
attattgggcttcccggagtgtcaggtaaagatggtatccctgggttgaggggtccgcct
ggccgggatgggaatcccggcccgatagggcttgctgggaatcccggtccacccggagta
gctggtgaagatggacgacatggacctcctggccctcccgggcctgtgggaccaccgggt
cctccgggagaaggaaatttcggatatgatgcagcttctttagcagccctcatgatgcag
ggacagaccaaagggcctgattcaatggtaggagacgagcctttgagacttttcggcaaa
gagatgactaaagatgagcaaaacaagctcctcactagagcctatgagcacttcaagtca
atagtccagaatgccattgagcccgatggcgatgagaattctcctgctcggacttgcaga
gatttatttatttcacatccagataaaccgtcaggcgagtactggatcgaccccaacgga
ggcgatgttcgcgatgcaattgttgttcattgcgacgtgaataaacgtgcaacatgtatc
ttcgcgagtccttcgaggacggaagagattaatcacttaggccgtcatctcggtggcgga
atttggctcagcgaaatagaggatggcatgaagataagttataaagcggatagcaatcaa
atcggaatgctccaattattgtcgacgcatgccgagcagaatttgacgtatcattgtaag
aatagtgttgcctattacgatgaggaacacaaaacacacaggcgtggactgaagttactc
gcgtggaatgacgtcgaattgacgccacggggtaatcagcgactacgatatgacgcaact
ttggatggatgccagacccgggcgaatgaatgggctacaactgaaatcacatataccacg
gataagcccacacgccttcctttggttgatattgcgctgagagacatcggcaaacccgag
caaagattttggatcgagatcaattccgtctgctatcgataa
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