Diachasma alloeum: 107037578
Help
Entry
107037578 CDS
T07663
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
dam
Diachasma alloeum
Pathway
dam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107037578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dam03041
]
107037578
Spliceosome [BR:
dam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107037578
Complex C
U5 SnRNP specific factors
107037578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Ge1_WD40
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
107037578
NCBI-ProteinID:
XP_015111686
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MPTADKRKGDEILALVPASKRTKNEVVFSSREKAVVQNGPPRTSSLIAPIMLLEGHQGDI
FSLEFHPEGQYLVSTGFDRQIFIWNVYGECENIGAMSGHSGAVMEIHCSSDGNLLYSAST
DMTLGLWDIIAGTRIKKLKGHTSFVNSVAGARRGPTQLCSGSDDSTIRIWDPRKRGQCYT
LNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRKNSVLYKLKGHSDTVTGISLSPDGSY
VLSNSMDNTLRIWDVRPFAPYERCVKMLSGHQHNFEKNLLRCAWSPDGSKVSAGSSDRFH
YIWDTTTRRILYKLPGHNGSVNDVDFHPKEPIVCSGSSDKQIYLGEIEP
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgcagacaagaggaaaggcgacgagatcctggctctcgtgccagcctcaaag
aggacaaagaatgaagtggtgttcagtagcagagaaaaagctgtcgtccagaatggtcca
ccacgaacgtcctccctgatcgcaccgattatgctgttggagggacatcagggtgatatt
ttctcactggaattccacccggaaggacagtatctcgtgtctacgggtttcgatcggcaa
attttcatttggaatgtttatggcgaatgtgaaaatattggagctatgtctggtcacagt
ggagcagtgatggagatccattgcagttccgatggaaatctcctgtattcagctagcaca
gatatgactctgggcttgtgggacataatagcaggaacgagaataaagaaactcaagggc
cacacctccttcgttaattcagtggccggagcacgcagaggcccaacacaactatgctct
ggaagcgatgacagcactatcagaatctgggatccaaggaaacggggtcaatgttacact
ttgaataacacgtatcaagtaacagcagttacgttcaatgatacagctgagcaagtcatc
agcgggggaatcgacaatgatatcaaagtatgggatttacgaaaaaattcggttctctac
aagttgaaagggcattccgataccgtcactggcatcagcttgagtccagatggctcgtac
gtactatcaaattctatggacaatactttgagaatttgggacgttcgaccattcgctcca
tacgaaagatgtgtcaaaatgttgtctggtcatcagcacaattttgaaaagaatttgttg
aggtgtgcttggtctccagacggtagcaaggtctcggcaggctcttctgaccgattccac
tatatttgggacacgacgactagacggattttgtacaaattacccggtcacaacggatct
gtcaacgatgttgacttccacccgaaagaacccattgtttgctctggatcaagtgataaa
cagatatatttgggagagattgaaccatga
DBGET
integrated database retrieval system
