Diachasma alloeum: 107037717
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Entry
107037717 CDS
T07663
Name
(RefSeq) ATP-dependent RNA helicase p62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dam
Diachasma alloeum
Pathway
dam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107037717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dam03041
]
107037717
03009 Ribosome biogenesis [BR:
dam03009
]
107037717
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107037717
Spliceosome [BR:
dam03041
]
Complex A
U1 snRNP components
U1 related factors
107037717
Complex B
107037717
Ribosome biogenesis [BR:
dam03009
]
Eukaryotic type
Pre-60S particles
Helicases
107037717
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
107037717
NCBI-ProteinID:
XP_015111896
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MTYGGSSGGGAGGGYRAGGGGGQRGGPPRNSYGGGGGGGGGGNRFGGSRGGNAGSNNRFG
NRGGNMKGGRSGGAGGNLRKPNWDYENLKPFKKEFYVPHADVANRHPREVEAYRGEKQIT
LKGEKIPNPIQYFEEGNFPDYVMQGIRKQGFSEPTAIQAQGWPIAMSGGNMVGIAQTGSG
KTLGYILPAIVHINSQQPLNRGDGPIALVLAPTRELAQQIQTVAQDFGSLSYVRNTCIFG
GAPKGGQARDLERGVEIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIR
KIIEQIRPDRQVLMWSATWPKEVRNLAEEYLTDYTQLNIGSLSLSANHNILQIVDVCQEH
EKEAKLGTLLQEIGNVNDDGGKTIIFVETKKKVENITNNIRRYGWPAVCMHGDKSQQERD
YVLREFRNKKGSILVATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRSHSTGTS
YAFFTPQNSRQAKDLINVLKEANQVVNPKLNELAAKSGGGSYGGRNRWGYGGGRGGRENT
FSGQHKRFDNRGSGYGNYS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgacttacggaggttcatccggtggaggtgctggtggcggttaccgcgcgggtggaggc
ggaggtcagcgtggcggtcccccccgcaacagttatggcggcggtggtggtggtggtggt
ggtggaaatagattcggtggcagccgcggtggtaacgccggctccaacaatcggtttgga
aatcgtggcggaaacatgaagggaggcagaagtggaggtgctggaggcaatcttcgtaag
ccaaattgggattacgagaatctcaagcctttcaagaaggagttctacgtgccccacgca
gatgttgccaacagacatccccgtgaggtcgaggcttatcgtggcgagaagcagataacc
ctgaagggcgagaagattcccaatccaattcagtacttcgaggagggcaatttccctgac
tacgtgatgcaggggataaggaagcagggattttcagagccaacggctattcaggctcaa
ggatggcccattgccatgtcagggggcaatatggttggaattgcgcagacaggatctgga
aagactctggggtacattcttccagctattgttcacatcaacagccaacagccactcaat
cgtggagatgggcccattgctctggtccttgcacccactagggagctagctcagcagatt
cagactgttgcacaggactttggatcgctctcttatgtcaggaacacctgcatctttggt
ggtgcacccaagggtggacaggcacgagacctcgaacgaggggtggaaattgtcattgcc
acacctggacgtctcattgacttcctcgaacgtggcaccaccaatctcaggaggtgcact
tatctcgttctcgacgaggctgatcgcatgctggatatgggattcgagccacagatcagg
aagatcattgaacagattaggcctgataggcaggtactcatgtggtcagccacttggccc
aaggaggtcagaaatcttgctgaggagtatctcactgattacacacaactgaatattggg
tcactttcgctgtctgctaatcataacattctgcagatcgttgatgtttgtcaggagcat
gagaaagaggccaaattgggaactctccttcaggaaattggcaatgttaacgatgatggt
ggcaaaacaatcattttcgttgagacaaagaaaaaagttgaaaacatcacgaataatatt
cgtcgttacgggtggccagcagtctgcatgcatggcgataagtcacagcaggaacgtgat
tatgttttaagagaatttaggaacaaaaaaggctcgattctcgtagcaacagacgttgca
gctcgtggattagacgtcgatgacgtgaagtacgtgatcaacttcgattatccatcgtcg
tcagaggactacatccacagaattggtagaactggacgttcacactcaactggcacgagt
tatgcgttcttcacaccacagaacagccgacaggctaaggatctgattaatgtacttaaa
gaggctaatcaggttgttaatcctaagctgaatgaacttgctgccaagagtggaggtgga
tcttatggtggacgcaatcgttggggatatggaggtggtcgaggtgggcgtgaaaacaca
ttctcaggacagcataaacgatttgacaaccgtggcagtggctatggaaactacagttga
DBGET
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