Diachasma alloeum: 107037929
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Entry
107037929 CDS
T07663
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
dam
Diachasma alloeum
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dam03041
]
107037929
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107037929
Spliceosome [BR:
dam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107037929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
R3H
Helicase_C
DEAD
Ank_2
Ank
nSTAND3
HA2_N
AAA_19
AAA_22
Ank_5
ATPase
PhoH
T2SSE
Ank_4
NPHP3_N
ResIII
Ank_3
Sigma54_activat
SRP54
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
107037929
NCBI-ProteinID:
XP_015112250
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MPRRKNHQTKVAIGEDTRIAVNLTVKKLLDCPEQKELEFPSSYTAEERAYIHQLAAQLGL
KSKSRGKGANRFLTVYKREGSTIIQSDASIKLNKLSKQTMLNLIQKFPLNNKERQDLLPP
TERERTMDNEVTTNTKAMGRLNGTIAQVPQLRTNQDLVQLRRSLTVFNAREKILEALSSS
QVVIIAGETGSGKTTQVPQYILEHCQQKNQACRIICTQPRRLSAVSVAERVAFERDEKIG
QTYGYQIRLESRVAPKTLLTYCTNGVLLRTLMGGDAALGTITHIIVDEVHERDRFCDFLL
IALKEALVKFRSLKLILMSATMDTNIFVKYFTQCSVINVPGRSYDVDVYFLEDVLKITGY
TTDRMHEKRKELINKKEQRKVLDSWTQYTPQQTGRAPVNGKPPVPSPILGQQTEPQPERV
ELEPWLREEMDKSISDAWLIGGEDNFAQLLHLILSENISVDYQHSSTLVTPLMVAAGRGC
LNTTEQLLNLGANLNIRASNEWTALDWAKKMNQIECAELIEAYLKTYDCKLEDSGVQNID
TPLSEEDKFLLDIYHNTFNDDNINYDLLFILIQYIHTKQPPGSILVFLPGYDDIVMMRDR
INSEEKRMNQPMIYDLFVLHSNMQTADQKRVFRPSLPGYRKIILSTNIAETSITIDDVVY
VIDSGKVKEKSFDAISGVCTLRSNWISQACAKQRKGRAGRCQKGICYRLFSSIRYNSMQA
YSTPEILRLPLQELCLFTKHLAPGNTPIAEYLDRALEPPSNIVTRNAVQLLKSIDALDAW
EDLTELGTHLLDLPVEPRLGKMLLYAVVLKCLDPILTIVCSLAYKDPFLLPSQPSQKRAA
TAARKTFASGSYSDHMAVLRAFQLWQQARASGWERKFCEKNFISSAVMEMITGMRSQLLG
QLRASGFVRARGTGDIKDLNWNSENWAVVKAALTAGLYPNLIRVDREHGQLRTQKESKVF
FHPSSTLKEFSKSTRTTSAQSHSASVHTLPSDWLIYEEMSRAGRFCHVKTVTLVNPITVA
LLSGPARLAMDTIYETESVPESESDSEAEETREGMTILKLDDWVVFKLDFEAARLILHLR
QKWNALFLRRMKNPTRSMTALDDQVVKAMVSIISNEEQACELPQPSGIGQRPRPLIVDYY
PANARRNDDEDRTY
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggcgcaagaatcaccagacaaaagtggcaattggggaggatacgaggatagct
gttaatttgactgtgaaaaaattgctggactgtcctgagcagaaggagctggagtttccc
tcgtcctatacagctgaagagagggcttatattcatcaattggcagctcagcttggattg
aagtccaaaagtcgaggaaaaggagctaatagattcctcacagtgtacaaacgcgagggt
tctacaataatccaatcagacgcgtcaataaaactgaacaagctttctaaacaaacaatg
ctcaatctaatccagaaattccccttgaacaacaaagagagacaggatctactccctcca
accgagcgagagcgcacgatggacaacgaggtgacaacaaacacaaaagccatgggcaga
ctgaatggtacaatagctcaggtgcctcagctgcgaacgaatcaggacctcgtgcagctg
cgaaggagcttgacagtcttcaacgctcgtgagaagatcctggaggccctctcctcaagt
caagtggtgataatagctggtgagaccggctcaggaaagaccacgcaagtcccccagtac
atcctcgagcattgccagcagaaaaaccaggcctgcaggataatctgcacccagccaaga
cgactctcagctgtttcagttgctgaaagagttgcttttgaacgtgacgagaagattgga
cagacttacgggtatcagataagactggagagtcgagtggcgcccaagaccctgttgaca
tactgcacaaacggagttctcttgagaacactgatgggaggtgacgcagcgctggggaca
atcactcacataatagtcgacgaggtccacgaacgcgatcgcttctgtgattttctcctg
atcgccctcaaggaagctctggtcaagttcagatcactgaagctcatcctgatgagtgca
accatggacactaacatcttcgtcaagtacttcacccagtgcagcgtaataaacgtccca
ggaaggtcctacgacgttgacgtatacttcctcgaagacgtcctcaagatcactgggtac
acaaccgacagaatgcatgagaagcgaaaagagttgataaataaaaaagaacagagaaaa
gtcctggactcctggacgcagtacacccctcagcagacggggcgagctccagtgaatggc
aagcccccagtgccatcgccaatcctgggacaacagactgaaccccagcccgagagagtc
gagctggagccctggctgagggaggaaatggacaagagtatttcagatgcctggttgatc
ggtggagaagacaatttcgctcagctgctgcacttgattctctccgagaacatttccgtc
gactaccagcacagcagcaccctggtgacacctctcatggtggcagctggccgaggctgc
ctcaacacgactgagcaactcctcaatctgggggccaatctgaatatccgagcaagtaac
gagtggacagccctcgactgggcgaagaagatgaaccagattgagtgtgctgagctaatc
gaagcctacctcaaaacttacgactgtaaactcgaggattccggggttcaaaatatcgac
acacccctctcagaagaagacaaattcctcctcgacatttatcacaatactttcaacgac
gacaacatcaactatgaccttctattcatcttgatccagtacatccacacgaaacagccc
ccaggatcgatcctggtcttcctcccagggtacgacgacatcgtcatgatgagggacagg
ataaactctgaggagaagcggatgaaccagccaatgatctacgacttattcgtcctccat
tcgaacatgcagacagccgatcagaaacgagtattccggcccagtctccccggctacagg
aagatcattctgtcgacgaatatcgctgagacaagcataacaatagacgacgttgtctac
gtgatagactctggaaaagtgaaggagaagtcattcgatgcgatctcgggggtctgcacc
ctgaggtccaattggatctcccaggcgtgtgctaaacaacgaaagggtagagctggtaga
tgccaaaagggcatttgctacaggctattctcctcgattcgttacaacagcatgcaggcg
tactcgacaccagaaatcctgagactacccctccaagagttgtgtctgttcaccaagcac
ttggccccagggaacacgccgattgccgagtaccttgacagggccctcgagcccccatcc
aacatagtaacgaggaatgctgtgcagttgttgaaatctattgacgccctcgatgcctgg
gaggacctgacagaacttggcactcatctcctagaccttccagtggagcccagacttggg
aaaatgttgctttacgctgtcgtcctcaagtgtttggatccaatcctgacgattgtctgc
agtcttgcttataaggatccatttctgctgccgtcacagccctctcagaagcgcgcagcg
acagcagcgaggaagacctttgcgtcaggctcttactcagatcacatggcagtgctgagg
gctttccaattgtggcagcaggcgagggcctctgggtgggagaggaagttctgtgagaag
aattttatatcatcagctgtgatggagatgatcacggggatgagatctcagttgctgggg
cagctcagggcctcgggattcgtgagggccaggggcactggggatatcaaggatctcaat
tggaactcggagaactgggctgtcgtcaaggctgcgctcactgctggcctctatcccaat
ttgatcagggtggacagggagcatggacagctgaggactcagaaggagtccaaggtcttc
tttcatccgtcctcgacgttgaaagagttctcaaagtccactaggaccacctcagcgcag
tcacactcggccagtgttcacacactgccctctgattggctgatttacgaggagatgagc
agagctggacggttctgtcacgttaagactgtaactctagtcaatcctattactgttgct
ttactcagtggacctgctaggctggcaatggataccatttatgagacggagtctgttccg
gagagtgagtcggattctgaggctgaggagacgcgcgagggcatgactattcttaaattg
gatgactgggttgtcttcaagctggactttgaggcagccaggctgattttacatttgagg
cagaagtggaatgcacttttcttgaggagaatgaagaatcctacgaggagcatgacagca
ctggacgatcaggtagtcaaggccatggtttctatcatcagtaatgaggagcaggcttgt
gagctaccgcagccttccggcattggacagaggcctagaccactcattgttgattattat
cccgccaatgcgaggaggaatgacgatgaggacagaacttactag
DBGET
integrated database retrieval system
