Diachasma alloeum: 107038115
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Entry
107038115 CDS
T07663
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
dam
Diachasma alloeum
Pathway
dam04382
Cornified envelope formation
dam04512
ECM-receptor interaction
dam04518
Integrin signaling
dam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107038115
04518 Integrin signaling
107038115
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107038115
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107038115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dam04147
]
107038115
00536 Glycosaminoglycan binding proteins [BR:
dam00536
]
107038115
Exosome [BR:
dam04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107038115
Glycosaminoglycan binding proteins [BR:
dam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107038115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107038115
NCBI-ProteinID:
XP_015112506
LinkDB
All DBs
Position
Unknown
AA seq
1952 aa
AA seq
DB search
MTRSALRFIATVVCLSVVVTGESNNTAWIRSGRVRGVRDTNERDRGDIASEGGETAPSSW
GDGDSYEDSLRESYRGRSEYNQSYPYDPYNRGGGGYGYDSSQDRNRNDGSRGGEVSGQSY
GGQSGYGSQGQSYSGQGGQSGYGSAYDQRGRDGYNQGGRDGHSQGGRDGYSQGGRDGYNQ
GGRDSYNQGGRDANNQGGYGQGTDNRSGSGTGSGYGQYPDSYQVYPVPGDRTSKNCTGSG
CCAPKCFAEKGSRGPPGIIGPAGPKGQVGFPGAEGLLGPKGEKGDPGPQGPIGIKGDRGP
MGFPGFPGIAGVPGVQGYPGSPGMPGRDGCNGTDGEPGRPGVPGEPGPRGYRGGTGPKGD
KGQPAYAGKYPVGQKGEPGLDGVRGPPGQPGPQGPPGYPGPKGDRGPFGAPGALGPKGAK
GNMGLGFEGLKGDKGLKGEPGPPGREPEYPPFTGTTSTVGPTGEPGQKGDKGDQGFDGPK
GEIGFSGDAGVPGSHGGKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGIDGLDGLPGRH
GQKGEPGLDGPSGVTGLRGPPGPPGGGKGQPGPPGPIGPRGFPGPVGPRGLDGYPGEPGP
RGPIGLTGGPGLPGIPGAEGAPGDKGVKGEPGLTGFPGEGGPRGFDGPPGPAGPRGPQGD
KGFSIIGPKGMDGSPGLDGAKGQKGERGYVGVRGRPGDSLDGIPGAPGVPGLPGEAGLAG
RDGSPGFPGEPGEKGDIGGRCSDCVPGYPGVKGDRGFDGTPGLPGPRGPPGERGYPGEAG
ADGLPGPIGPPGPAGKDGINGLPGPQGEPGAPAFITENMLKLEKGEKGVRGEPGRPGPVG
PEGPIGEKGRPGFEGFPGLKGQVGDRGFPGQDGTPGRPGVPGRKGEKGSSIKGEAGIPGR
DGYPGPKGEPGPYGEKGATGQCPPINLEKGFKGDRGAPGEKGEPGPPGRDGPPGLKGLQG
LQGLEGPTGPIGAPGPVGPRGLPGPRGEKGDIGPMGFPGEPGQEGPRGFPGIPAPKGEKG
EPGLSMKGSQGLSGPPGEKGERGLPGPPGKEGPAGYSGLPGFTGEKGDIGSPGINGLPGA
PGEKGDTGLTGPPGPPGVAGFPGVDGAKGEPGLTGEPGRAGLPGFPGAKGDRGEPGIDGP
KGYPGRRGIPGVAGRPGLEGSIGPKGEQGEKGPSGFPGLPGMEGKPGRPGVQGPKGDRGF
DGSPGLPGPMGLDGPKGDHGQPGFPGRKGEPGSVSDKGQKGEPGMPGIRGPTGPPGRDGV
DGEKGEAGRPGFARDGFPGLKGEPGERGLDGLPGLQGDKGDTGVQGFPGMKGDRGFPGPY
GEPGKPGLDGLPGEPGEIGPHGPPGYPGINGEIGQPGRPGLDGVKGDVGPQGLDGLPGLP
GSFGEKGDRGPPGPTVNIKGEKGEPGSPGFHGLDGEKGDRGFEGQTGFEGAKGDRGAPGP
MGNPGAPGAPGPKGDHGPTGAPGGPGQTVKGEKGLPGLLGKHGRDGFPGIPGDKGEPGFP
GLPGPKGDAGTWGPPGLQGEKGEPGPIGPEGLPGRSGEPGFEGAPGIPGERGPKGDQGPP
GVFGGVGQKGDRGLSGPPGLDGIPGEKGDRGFDGSPGAPGFPGEKGDRGYPGPTGLIGAI
GYVGIKGDKGDECVEPPMGPKGDRGYPGSPGAPGQSGEKGMEGPPGFPGAPGPKGAAGYS
GAPGQPGLPGLAGPVGPPGLPGLEGPAGIPGPRGEPGAPCEQASDYLTGILLVRHSQSQS
VPFCEPGHIKLWEGYSLLYTDGDERAHSQDLGYAGSCVRKFSTMPFLFCDVNNVCHYASR
NDRSYWLSTNSPIPMMPVEETGIEEYISRCVVCEVPANVLAVHSQSLSIPECPNGWSGLW
IGYSFVMHTGAGSQGGGQSLSSPGSCLEDFRATPFIECNGAKGHCHYYANEFSFWMATIE
DRQQFQRPEKQTLKAGNLRSRISRCQVCIKNT
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgacccggtcggcattgcgattcatcgcaaccgtggtctgcctgtccgtagtcgtcaca
ggggaaagcaacaacacagcatggatacggagtggtagagttcgtggcgtgagagataca
aatgagagggaccgaggggatattgcgtctgaaggtggagaaaccgcgccaagctcgtgg
ggcgatggagattcatatgaagattccttgagggaatcgtatagaggaagatcagaatac
aatcagagctacccctacgacccttacaacagaggaggtggtggatacggctatgacagc
tctcaggatcgaaaccgtaacgatggaagtcgtggaggagaggtttctggtcaatcctat
ggaggccaatccggttacgggagtcaagggcaatcctacagtggtcagggtggtcagtct
gggtatggaagtgcttacgatcagcgcggaagagatggttacaaccagggaggcagggat
ggtcatagtcaaggtggaagagatggttatagccaaggtggaagagatggttacaaccag
ggaggaagagatagctataatcagggtggaagagatgccaacaatcaaggcggatatggc
cagggcacggacaacagatctggatcaggaacaggatcaggatacggtcaatatcctgac
agctatcaggtgtacccagtacccggtgacaggacttcaaaaaactgcactggttctggc
tgttgtgctcccaagtgctttgctgagaaaggatcgaggggacctcctggaatcatcggt
cctgctggtcccaagggtcaggttggttttcctggtgctgaaggtttactgggacccaag
ggagagaagggagatcctggcccacagggacctatcggaatcaagggtgacaggggacca
atgggattccccggattccctggaatcgctggtgttcctggtgttcaagggtatcccgga
tcacctggtatgcctggacgagacggttgcaacggaacggacggagaacccggacgtcct
ggagttcctggagagcctggacctcgaggttatcgagggggtacagggccgaaaggagat
aagggtcagccagcgtatgcaggaaaataccccgttggtcagaaaggagagcctggcctt
gacggagttagaggaccaccagggcaacctggaccacaaggtccacctggttatcctggg
cccaagggtgatcgtggaccatttggtgctccaggagccctaggacctaagggagcaaaa
ggtaacatgggattgggattcgaaggtttgaaaggagacaaaggtctgaaaggagagccg
ggccctcccggtagagagccagaatacccaccgttcacaggaacaacgagtacagttgga
ccaactggtgaaccgggacaaaaaggagacaagggagatcaaggatttgatggacccaaa
ggagaaatcggtttttcaggagatgctggagtgcccggttctcacggtggcaagggagaa
aaaggtctccctggagctccaggtattcgagggagagatggtttctctggtcctcctggc
cctccaggacggaagggtgaccgtggcatcgatggattagacggattgccaggtagacat
ggacaaaaaggagagcccggacttgatggaccttctggggtgactggtcttcgtggacct
cctggaccgccaggaggtggcaaaggacaaccgggtccgcccgggccaatcggacccaga
ggatttccagggccagtaggacctagaggtttggacggttaccctggagagcccgggcca
cgtggacctatcggtttaactggtggtcccggtctacccggtattcctggagctgaagga
gcacctggcgataaaggagtgaaaggagagcccggtctgacgggattccccggtgaaggt
ggacccagaggatttgacggccctccaggacctgctgggcctcgaggacctcaaggagac
aaaggattttcgattattggtccgaaaggaatggatggatctcccggtttagatggtgca
aagggtcaaaaaggagaacgcggttacgttggagttcgtggacgacccggcgactcgtta
gacggaatccccggtgctcccggagttcctggtttaccaggagaagctggacttgcaggc
agagatggcagtcctggttttcccggtgagcccggtgagaaaggagacattggaggtcgc
tgttcagactgtgtccctggataccctggtgtaaagggtgaccgtggatttgatggaaca
cctggattgccgggaccgagggggccacctggggaaagaggatatccaggagaggccgga
gctgacggattgccgggaccgattggaccccctggaccagctgggaaagatgggattaat
ggacttcctggaccacagggcgaacccggtgcgcctgcgttcatcacagaaaacatgttg
aaactggaaaagggtgagaagggagtgcgtggagagcctggaagaccagggcctgttgga
ccagagggacccattggagagaagggaagacctgggtttgaaggattcccgggtcttaaa
ggacaagtgggtgatcggggattcccaggacaagatggaacccccggtagacctggcgtg
cccggacgtaaaggagagaaaggatcaagtatcaagggtgaagcgggtatacctggacgc
gatggatatccgggaccaaaaggagaacccggaccctatggcgagaagggagcgacaggt
caatgtccaccaattaatttggagaaaggtttcaagggagatcgtggagctcctggagag
aaaggagaacctgggcctcctggacgtgatggacctcctggactgaaaggtttacaagga
cttcagggactagaaggaccgaccggaccgattggtgccccggggccagttggacctcgt
ggattaccaggaccacgtggtgagaaaggagatattggacccatggggttccctggtgag
cctggacaagaaggaccacgagggttccctggcataccagcgccgaagggagagaaggga
gagccgggattgtcgatgaaaggaagtcaagggttatctggaccacctggagagaaggga
gaacgaggtctgcctggaccacctggaaaggaaggacctgctggatactctgggctacct
ggatttactggggaaaaaggtgacatcggtagccctggaataaacggactcccaggtgcc
ccaggtgagaagggagatactggattgacagggcctcctggaccaccaggagtagcaggt
ttcccaggcgttgatggggctaagggtgaacctggtctgactggagaacccggccgtgct
ggcctccctgggttcccaggtgccaaaggagaccgaggcgagcctggtatcgatggcccg
aaaggttatcctggacgcagaggaattcccggagtcgctggacgtcctggattggaagga
tcaatcggaccgaagggtgaacaaggtgagaaaggtccatcaggtttccccggtctccca
ggaatggagggtaagccaggtagacctggcgttcaaggaccaaagggtgatcgtggattc
gacggatctcctggactgccaggaccaatgggattagatgggccgaaaggagatcacggt
cagcctgggttcccaggaagaaaaggagaacctggtagtgtgtctgataaggggcaaaaa
ggagagccaggcatgcctggcattcgtggaccaacaggtccgcccggaagagatggggtt
gatggggagaaaggagaagctggcagacctggtttcgctcgtgacggatttccggggctc
aagggagaacctggtgaacgtggactcgatgggttgcctggattgcaaggagacaaagga
gacactggggtgcaagggttccctggaatgaagggtgacagaggatttcctggaccttat
ggtgaacccggcaaacctggtctggacggtcttcctggagagcctggggagattgggcca
catggtcctcctggataccctgggatcaacggggaaattggacagcctggtagacctggt
ttggatggggtcaaaggtgacgtgggacctcagggattggacggattgcctgggctacct
ggatctttcggcgagaagggagatcgaggtcctcctggcccgacggtcaatatcaagggg
gagaagggagaacctggatcgccgggattccatggactggatggagaaaagggagatcgc
ggatttgagggacaaactgggtttgaaggagccaaaggagacaggggcgcacctggaccg
atgggcaatccaggagcccctggtgcacctggacctaaaggcgatcatggacccaccggt
gctcctggtggcccaggtcaaacggtgaagggagaaaagggtcttccaggacttctcggc
aagcacggacgcgatggtttccccggaattccaggagataaaggagagccaggtttccca
ggtttaccaggaccgaaaggagacgctggaacgtggggaccacctggacttcaaggggag
aagggtgagcctggtccgatcggtccagaaggacttcccggacgtagtggagagccagga
ttcgaaggcgccccaggaattcctggagagaggggacccaagggagatcaaggaccacct
ggagtgttcggaggagttggacagaagggagatcgtggactttcaggtccacctggattg
gacggtatacccggagaaaagggtgacagaggattcgacggttcacctggtgcgccagga
tttccgggcgaaaagggagaccgaggatatcccgggccaaccggattgataggagctatt
ggttacgtcggtatcaagggagataagggtgacgagtgtgtcgagcctccaatgggacca
aagggagatcgtggatatccaggatctcctggagcccccggacaatccggcgaaaaagga
atggagggtcccccaggtttcccaggtgctcccggtccgaagggagcagcaggatactca
ggtgcaccaggtcagccaggtctgccaggattagccgggcctgttggtcccccagggctt
ccaggtctcgaaggacctgcaggtattccagggcccagaggagagccaggagctccttgt
gaacaggcttcagactatctcaccggtattctcctggtcagacacagccagagtcagagc
gtacccttctgtgagcccggtcacattaaactgtgggagggatacagtcttctgtacaca
gacggagacgagagagcgcattctcaagatctaggttatgctggctcgtgtgtaaggaaa
ttctccactatgcctttcctcttctgcgacgttaacaacgtgtgccattacgccagtcga
aatgatcgctcttattggctgtctaccaatagtccgatacccatgatgcctgtggaggaa
acgggtattgaggaatatatctctagatgcgtcgtttgcgaagtaccagccaatgttcta
gcagttcacagtcaatccctcagcataccagagtgtcccaacggatggtctggcctgtgg
ataggctacagtttcgttatgcacaccggcgccggttctcagggtggcgggcagtcacta
tcgagccccggctcctgtctggaagatttccgcgcaacgcccttcatcgagtgcaacggt
gcaaagggacactgccactactacgcgaatgaattcagcttctggatggcaacaatcgag
gatagacagcaattccagaggcccgagaaacaaacactcaaagctggtaacctaagaagc
cgaataagtcgatgccaagtttgtataaagaatacgtaa
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integrated database retrieval system
