Diachasma alloeum: 107038119
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Entry
107038119 CDS
T07663
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
dam
Diachasma alloeum
Pathway
dam04382
Cornified envelope formation
dam04512
ECM-receptor interaction
dam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107038119
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107038119
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107038119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dam04147
]
107038119
00536 Glycosaminoglycan binding proteins [BR:
dam00536
]
107038119
Exosome [BR:
dam04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107038119
Glycosaminoglycan binding proteins [BR:
dam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107038119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107038119
NCBI-ProteinID:
XP_015112511
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MWPGGGDIASCGRRRMHLVTPVVICIVGILVGWQAPATEAVVCHDNYKCNCKGIKGTPGF
PGIAGPQGPSGSPGDDGPEGPLGPKGEKGAGGEPGGTGEKGHRGDKGMKGFLGDAGLPGH
RGTPGVRGPDGLDGCNGTDGRAGAPGMTGAYGPRGGPGLLGDPGPAGEPGEGGINSLGVK
GVRGNAGRDGPKGFDGPPGYIGEPGYAGDTGDFGYQGEPGLPGLTGDQGDTVYGDKGQPG
EQGDRGEPGPINKEWKKNNDSEPEPGAPGRKGVRGDYGDRGRKGEMGDKGPMGRPGYLGV
KGVKGEQGDDGPRGKQGVTGPSGPAGEKGDKGAPGYAGRPGEDGLDGEPGEIGNRGPPGR
QGAPGEKGLYIPELDEIIPGPIGVQGELGPPGEPGQNGTPGRPGLVGYIGPPGLPGPQGP
LGIPGPKGTSEKGEQGDDGLPGPLGPPGPPGRPGLVGPIGAKGFPGVTIIGPPGIDGKPG
FSGLNGPPGERGDPGPEGPKGFPGKGVRIRGPAGEPGLPGTPGRPGPDGWPGVPGPRGAK
GIRGDDCGVCAPGLPGAKGERGDSGLNGFPGAPGYSGLPGPRGFKGAYGVPGSMGPMGLE
GESGRPGIAGSQGPKGQAGRIVPPPGPARVAPPGDVGDKGFPGFEGLRGPRGPPGEIGDT
GPEGPKGEKGDFGAPGVTGVDGRPGWDGLAGEKGDDADVPIEFLRGDPGVDGIPGVKGVR
GDKGWPGEVGEAASHVITDIKGNKGTKGESGAPGYDGFQGFQGPQGDEGWPGPPGPQGSP
GFSLQGASGLKGYAGMPGDEGPRGIAGEPGKRGPQGLLGPPGVKGERGDIGTNLIYGEIG
ERGLYGQKGEYGFEGPAGPRGRPGVDGPKGVRGAKGAPGFEGLPGLQGAKGVRGDSIQGP
RGFPGAPGLPGGIGMRGNVGMTGPDGISGFDGMKGLKGEIGFHGRQGEDGDMGIQGYPGM
EGIPGAPGKQGEDGDIGVIGDSGQPGWIGEDGSPGAVGQKGELGEPGSPGFPGIQGPVGL
PGMVGDIGYDGPDGERGENAFSGPQGDLGEPGFMGAIGAPGAPGVDGRPGLPGDNGVDAV
GYNGSPGPKGEPGWNGLHGRPGPKGEIGDMGPDGFKGEIGDSGAQGRPGTPGINGRPGTK
GERGPVGPIGLDGVKGQRGLDGDPGFMGAPGMPGDAGPRGRPGLSGVPGPKGIVGDPGLP
SYMDADKGERGDQGFHGLHGRKGEQGDVGLRGYPGARGMRGDIGYPGPDGFEGLPGLPGL
PGDVGFPGLPGPPGQNPQRGEPGLPGLDGRPGIPGRPGQKGAPGEYGPDGPKGIEGEPGR
SIPGAKGLPGDLGPRGYEGRPGAPGLRGLDGFPGAPGLKGYRGEPGYAQYGRKGEEGDVG
FQGSDGRHGFKGERGDSGIPGAPGFPGLKGERGEMGESGPIGLPGPDGPQGPKGDHGTSP
YPLFPRKGLQGDVGFPGLSGIPGAPGMMGMPGLDGLPGLEGERGVDGLPGFPGPDGDNGS
PGPQGPRGAIGYQGAPGFQGPRGEDAPPGPGPRSRGFHFARHSQSEMIPLCPRGAVKMWD
GFSLLHIMGNSHPWAQDLGQPGSCVKKFSVMPFLFCNLNNVCDYAQRNDYSYWLSSTEPM
PMMMTPIPAPEAGRYISRCSVCEAPTRMIAVHSQSMQIPECPGGWEEAWIGYSFLMHRDA
GAAGGGQSLISPGSCLEEFRTRPFIECRGLGTCNYFSTAISYWLATIEDHEMFRKPQPQT
LKADHTSRVSRCAVCIRRQVTETYGNRLSPFTANGSRYIPPVPVNPQPVQTVPEWQRRRP
PGGRVRVPGGRVPQNQRRRGRVRRPVQANNSSQSSLARAA
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgtggcccgggggtggtgacatcgcctcctgcggcagacggagaatgcacctggtgaca
ccggttgtcatctgcatcgttgggattctggttgggtggcaggcgccggcgactgaggct
gtggtgtgtcacgacaactacaaatgtaactgcaaaggaataaaaggaacccctggattc
ccaggtatcgctggtccccaaggtccctcaggatccccaggagacgatggaccggaaggg
cccctcggaccaaaaggtgaaaaaggagctgggggtgagcccggtggaaccggtgaaaaa
ggtcacagaggagacaagggaatgaaaggtttcttgggtgatgctggtctgccgggtcac
cgtggtactcctggtgtgagaggtcccgacggattggacgggtgtaatggaactgacgga
cgagctggtgcccccggaatgaccggagcctacggtcctcgcggtggtcctggactcctt
ggagatcccggacctgcgggagagcccggcgagggggggatcaactcgctaggggttaag
ggagttcgaggaaatgccggtcgtgatggaccgaagggcttcgacggtcctccaggatac
attggagagcccggttacgccggtgacaccggtgacttcggctatcaaggtgagcctggt
ctgcctggactgactggcgatcagggtgatacggtttatggggacaagggacagcctgga
gagcagggagatcgcggagaaccgggaccgattaacaaagagtggaagaagaataatgac
tcggaaccagagcctggagcacccgggaggaaaggtgttcggggggattacggcgatcgg
gggaggaagggagagatgggagataaaggccctatgggacgacccggatacctaggtgtg
aaaggtgtgaaaggagagcaaggcgatgacggtcctcgtggaaaacaaggtgtcacaggt
ccgagtggacctgccggtgagaaaggagacaagggcgcgcctggatatgcaggacgtccc
ggagaagacggccttgacggtgaacctggagaaattggaaaccgtggacctcctggaagg
cagggagcgcctggagagaaaggactgtacattccggaactggatgaaatcatccctgga
cctattggagttcaaggagaacttggtcctcctggagagccaggacagaatggtacgccg
ggtcgtcctggattagttggatacatcggacctccaggtttaccgggaccacagggacca
ctggggattccaggaccgaagggaacgtccgagaaaggggaacagggagacgatggactg
ccaggtcctctgggccccccaggccctccaggaagacccggtcttgttggaccgatcggt
gctaaaggattccccggtgttaccatcattggaccacccggtatagacggaaaacccggt
ttcagcggtttgaatggaccacccggagagcgcggagatcccggaccagaaggtccaaaa
ggttttcccggcaaaggtgtgagaattcgaggtccagccggtgagccaggtcttcctggc
acaccaggacgtcctggacccgacggttggccgggtgtaccagggccaagaggtgccaaa
ggtattcgcggagatgactgtggagtgtgcgctccaggtttgcctggtgctaaaggagaa
cggggtgactcgggtctgaatggattccccggtgccccaggatattctggattacctgga
ccccgaggctttaaaggagcatacggggtacctggtagcatggggccaatgggtcttgag
ggagagagtggtagaccgggtatcgctggttctcaggggcccaaaggacaagcaggacgc
attgttccaccccctggtcctgccagagttgcaccaccaggtgatgtcggtgacaaaggt
ttccccgggttcgagggtctccgtgggccgcgtggtccacccggtgaaatcggagacaca
gggcctgaaggtcctaaaggagaaaaaggagattttggtgcacctggagtcacgggagtc
gatggtagacccggatgggatggactagctggagagaaaggagatgacgctgatgtgccg
atagagtttcttcggggggatcctggcgtcgatggaatacctggggtgaagggggttcgg
ggagacaagggatggcccggcgaagtgggggaagctgcttctcacgttattactgatatc
aaggggaataagggaactaaaggagaatctggagcgcctggttacgatggattccaaggt
tttcaaggaccgcaaggagatgagggttggcctgggccacctgggcctcagggatccccc
ggattttctctgcaaggtgcaagtggtctaaagggatacgccggcatgcccggagatgaa
ggccctcgtggtattgctggtgaacctggaaagcgaggtccacagggacttctgggaccg
ccaggagtgaaaggagagcgcggagacatcggaacgaatctgatatacggagagattggt
gaacgtggactttacggccagaaaggagagtacggttttgagggtcctgctggtccgcgt
ggaagacctggtgttgacggtccgaagggtgtcaggggggctaaaggagcccctgggttt
gaaggattaccaggacttcagggagctaaaggtgtccgaggagacagcattcaaggacct
cgtggtttcccaggtgctccaggtttacccggagggattggaatgcggggcaacgtggga
atgacaggtccagacggtatttcaggtttcgatgggatgaagggtctgaaaggagagatt
gggttccatgggcgtcagggggaggatggggacatgggaattcaaggttacccaggtatg
gagggaattcctggggctcctggtaagcaaggagaagacggggacattggagtcatcgga
gattctggacagccagggtggatcggagaggatggatcaccgggggctgtgggacagaag
ggagagctgggagagcctgggagtccgggattcccaggtatccaaggacctgtggggtta
ccggggatggtcggagatattggatatgatgggcctgatggggagaggggggagaatgcg
ttcagtgggcctcagggagatctgggtgagcctgggttcatgggggccattggagctcct
ggggcacctggggttgatggacggcctgggttacctggggataatggggtggatgcagtg
ggatataatggatcacctggacccaagggagaacctgggtggaatggattgcatggaaga
cctggaccaaagggtgaaattggtgacatgggaccggacggattcaaaggagaaattgga
gatagtggagctcagggaagacctggaactccaggaatcaatggaagacctggtacgaag
ggtgaacgaggaccagtgggaccgatcggtctggacggagtgaaagggcaacgcggtctc
gatggagatcctggctttatgggagcaccaggcatgcctggtgacgctggccctcgtgga
agacctggtctgtctggtgtgcccggaccgaagggaatcgttggtgaccctgggttacct
tcgtacatggatgctgacaagggagagagaggtgaccaaggattccatgggctgcacgga
aggaagggagaacagggagatgttgggttgcggggataccctggagctaggggaatgcgt
ggagacattggttatcctggtccagacggttttgaaggcctacctggactgccaggtctt
cctggtgacgtgggattccctggactcccaggccctcctggtcaaaatcctcaacgcggt
gagccaggtctgccaggactggatggtcgaccaggtattcctggacgaccagggcagaag
ggagctcctggtgaatatgggcctgacggtccaaaaggtatcgaaggagagccaggacgg
agtattccaggggcaaagggtcttcctggagatttaggacccagaggatatgaaggtcgc
cctggagcaccaggattgcgaggactcgatggattccccggagctcccggtctcaaaggt
taccggggagagcctggatatgctcagtacggtcgcaaaggggaggagggtgatgtcggt
ttccaagggtccgatggcaggcatggattcaagggcgagaggggtgactctggtattccg
ggagccccaggcttcccgggtttgaagggagaacgaggagaaatgggagagtccggcccc
atcggtttgccaggacctgatggaccccagggacccaaaggagatcacggtaccagtccc
tacccactgttccccaggaaaggacttcaaggagatgtgggattcccaggcttgagtgga
atacctggagctccggggatgatgggaatgccaggattggacggtctgccaggactcgag
ggtgagcgcggagtggatggactcccagggttcccaggacccgatggtgataacggatcc
ccaggccctcaaggcccacgtggggccattggttaccaaggagctcctggattccaaggg
cctaggggagaggacgcaccaccaggaccagggcccagaagtcgtggattccactttgcc
aggcattcccagtcggaaatgattcccctttgtccgcgaggagctgtcaaaatgtgggat
gggttctcattacttcatattatgggtaattcacacccatgggcacaggatcttggacaa
cctggaagttgtgtaaaaaaattctcagtgatgcctttcctattctgcaatctgaataat
gtctgcgattatgcccagaggaatgactacagctactggttgagttcgacagagccaatg
ccaatgatgatgacaccaattccagcaccagaggctggaaggtacatctctaggtgctcc
gtgtgtgaagcaccgacgagaatgattgcggtgcacagtcagtcgatgcagattccagag
tgccctggtggatgggaagaagcttggatcggttacagcttcctcatgcatcgcgacgca
ggtgcagcaggcggtggccaatcgctaatatctccaggctcatgcctcgaggaattccgc
actcgcccgttcattgagtgtcgtggtctcggtacatgcaactacttctccaccgcaatc
tcctactggcttgcaaccattgaggatcacgagatgttccgtaagccacagcctcaaacc
ctaaaagccgatcacacgtcacgagtcagcagatgtgccgtatgcatacgacgtcaagta
actgagacctatggcaacaggctgagccccttcaccgccaatggatcgcgctacattcca
ccggtaccagtcaatccacagcccgttcaaactgttccagaatggcagcggcgccggccg
ccggggggtagggtcagagttcccggggggcgcgtaccccagaatcaacggagaagaggt
cgggttcgtaggcctgtccaggccaacaattctagccaaagttctttagcgagagcagca
tga
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integrated database retrieval system
