Diachasma alloeum: 107038349
Help
Entry
107038349 CDS
T07663
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
dam
Diachasma alloeum
Pathway
dam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107038349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107038349
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107038349
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
107038349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
107038349
NCBI-ProteinID:
XP_015112878
LinkDB
All DBs
Position
Unknown
AA seq
208 aa
AA seq
DB search
MGENQGPIICVPGQRLCPANKTSLPGPGTYELNGYIYAKLAGTVEILEDDNTKTIIVHGT
TEQSIVPTPGDIVTAMVTVVNQRFCKCIMKCIGDTVLTRTYRGILRKEDVRATEKDRVEL
YKSFRPGDIILARVMPMTEAHTYSLSTAENELGVVVAHSEEGVSMVPISWTEMQCPKTLT
KEFRKVAKVIPEHVITETECIILRHGND
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgggagagaatcagggacctattatttgtgttcctggccagaggctgtgtccagcgaat
aaaactagtcttcccggacctggaacttacgaattgaatggatatatttatgccaagttg
gctgggaccgttgaaatattggaggacgataatactaaaacgataattgttcatggcaca
acagagcagagcatcgttccaacgcccggtgacattgtcacagcaatggtaacagtggtg
aatcaaagattctgtaaatgcatcatgaaatgcattggagatactgttctgacgaggact
tacaggggaatattgcggaaagaggatgttagggcaactgagaaggacagggtggaattg
tacaagtcgtttcgacctggggatatcattctcgctcgagttatgcccatgactgaagcc
cacacctactcattaagtacagctgagaatgaattgggtgttgttgttgctcacagcgaa
gaaggagtttctatggtaccaatcagttggacggagatgcagtgccccaagacactcact
aaagaatttcgaaaagttgcgaaagttattcctgaacatgttatcactgaaactgaatgt
atcattcttcgtcatgggaatgattaa
DBGET
integrated database retrieval system
