Diachasma alloeum: 107038544
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Entry
107038544 CDS
T07663
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dam
Diachasma alloeum
Pathway
dam03022
Basal transcription factors
dam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107038544
09124 Replication and repair
03420 Nucleotide excision repair
107038544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dam03021
]
107038544
03400 DNA repair and recombination proteins [BR:
dam03400
]
107038544
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107038544
Transcription machinery [BR:
dam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107038544
DNA repair and recombination proteins [BR:
dam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107038544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
TniB
Motif
Other DBs
NCBI-GeneID:
107038544
NCBI-ProteinID:
XP_015113193
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MGPPKRVKKDGSSKKFPDRGKWKKRKEEDEYNEDDFGDGLETEGIPDAAKNDAEKLDENA
LEDEFGAKDYRSQMILKPDNTSRPLWVAPNGHIFLESFSPVYKHAHDFLIAISEPVCRPE
HIHEYKLTAYSLYAAVSVGLQTHDIIEYLKRLSKTSIPDGIVEFIQLCTLSYGKVKLVLK
HNKYFVESPYPEVLQKLLKDPVIQECRLRKAVEESDKDALITSIQGKTKALQFGAKPLPE
TTPGASVAQDGPTDISEVAAVPEDITTFYDKIDKEDEDEEEEQQLKIVSFEVNQEKIEVI
QKRCIELEYPLLAEYDFRNDTVNPDINIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVL
PCGAGKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAKDKP
MGCGILVTTYSMITHTQKRSWEAEQTMKWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQS
HCKLGLTATLLREDDKIADLNFLIGPKLYEANWLELQKRGFIARVQCAEVWCPMTPEFYR
EYLSCKMTRKLLLYVMNPNKFRACQYLIKYHERRGDKTIVFSDNVFALKHYAIKMNKPYI
YGPTSQNERIQILQNFKFNVKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRL
GRILRAKKGAIAEEYNAFFYTLVSQDTMEMNYSRKRQRFLVNQGYAYKVITKLAGMDGEP
DMFYKTREEQGQLLQQVLSASDTDADEEKIPGDGPKIVRKVGNLASMSGADDAVYYEYKK
SASSSTANKHPLFKKFRG
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgggacctcctaaacgagtgaagaaagacggttcatccaaaaaatttccagatcgaggt
aaatggaaaaaaagaaaggaagaagacgagtacaacgaggatgatttcggcgatggactg
gagactgagggtatcccagatgcggcgaagaatgacgctgagaaattggatgaaaatgcc
ctggaggatgagttcggtgccaaagactacagatcccagatgatattgaagccagataat
acctcgagacccctctgggtggctccaaacggccacatattcctggagtcattctcccca
gtttacaaacatgcccacgacttcctcattgccatatctgagccagtgtgtcgaccagag
cacattcacgagtacaaattaacagcatattcattgtacgctgctgtcagtgttggtctt
cagactcacgatattattgaatacttgaagagactcagcaaaactagtattcccgatgga
attgtcgagtttatacagttgtgcactctgtcgtatggaaaagtaaaactagtgttaaaa
cacaacaaatactttgtcgagtccccctaccccgaggtcctccaaaagctcctgaaagac
ccagtgatccaggaatgtcgtctccgaaaagcagtggaagaaagcgacaaagacgcccta
ataacaagtatccagggtaagaccaaagccctccagttcggagccaagcccctccccgag
acaacccctggagcttcagtagctcaggacgggccgacagacatctccgaggtggcggca
gtgcccgaggacataaccaccttctacgacaaaatcgacaaagaggacgaggacgaggag
gaggagcagcagctgaagatagtgagcttcgaagtgaaccaggagaagatcgaagtcatc
cagaagaggtgcatcgagctggagtacccactgctggcagagtacgacttcaggaacgac
acagtgaaccccgacataaacatcgacttgaagccctcggcagtgcttcgtccctaccag
gagaagagtctccgaaagatgtttggaaatggtcgagccaggtcaggagtgattgtcctg
ccctgcggtgcaggaaagagtttagtgggtgtgacagcctgctgcacagttcgcaagcga
gccctagttctctgcaactctggtgtctcagtggagcagtggaagcagcagttcaagatg
tggtcaacagctgacgactcgatgatctgtcgtttcacgagtgaagctaaggacaagccg
atgggctgtggaattctcgtgacaacgtactcgatgataactcacacccagaagaggtcc
tgggaggcagagcagacgatgaagtggctgcaggagcaggagtgggggatcatggtgctc
gacgaggtgcacactattccagctaaaatgttcaggcgagtcctgacaattgtccagtcc
cactgcaaactgggcctgactgccactctcctccgagaggacgacaagatagcggatctg
aacttcctgattggccccaagctctacgaggccaattggctcgagctgcagaagaggggg
ttcatcgccagggtccagtgtgctgaggtctggtgcccaatgaccccagagttctatcgg
gaatacttgagctgcaaaatgacgaggaaactccttctctacgtcatgaatccaaataaa
ttccgagcctgtcagtatctgataaagtaccacgagaggaggggcgacaagaccatcgtc
ttctctgataacgtcttcgccctgaagcattacgccataaagatgaataaaccctacatt
tatgggcccaccagtcagaacgagaggattcaaatcctccagaacttcaagttcaacgtc
aaagtgaacacgatttttgtgagtaaagttgcagacacgtcttttgatctccccgaggcc
aacgttctgatccagatatcctcgcatggagggtctaggaggcaggaggcgcagagactg
gggagaattcttcgagcgaagaagggggccattgcagaggaatacaatgccttcttctac
acacttgtctcccaggacactatggagatgaactactcgaggaagaggcagcgattcctc
gtcaatcagggatacgcttacaaagttatcacgaagcttgctgggatggacggcgagcct
gacatgttttacaagactagggaggagcagggccagctgctgcagcaggttctctcggcc
agcgatactgatgctgatgaggagaaaatccccggggatggacctaaaattgttcggaag
gttggaaacttggcgtcaatgtctggagctgatgacgctgtctattacgagtacaagaag
tcagcttcctcgtcgactgccaacaagcatccattgttcaagaagttcagggggtga
DBGET
integrated database retrieval system
