Diachasma alloeum: 107038856
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Entry
107038856 CDS
T07663
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dam
Diachasma alloeum
Pathway
dam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107038856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107038856
03012 Translation factors [BR:
dam03012
]
107038856
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107038856
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107038856
Translation factors [BR:
dam03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107038856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
HA2_C
AAA_22
nSTAND3
AAA_19
AAA_14
NACHT
ResIII
ATPase
NPHP3_N
NB-ARC
AAA_16
Rad17
AAA_23
Motif
Other DBs
NCBI-GeneID:
107038856
NCBI-ProteinID:
XP_015113650
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MSRFSWTDQRGGGHSRYGQSGDPAPGNSHDRRHNGVGHPRGGGRGRGRGGHPPGLKGKEI
GLYYRDKARKNDAKEHYFSLAPMVEETVETLLTRLKTPYAQESDSPDEATDYFNDKYNHI
KDSQFKRKFLDIVSGSIQQNLSRALLMTSKLIKNDKIDKQLIDEQSDRESLDDYQRMLDF
RSKLPSYKMREEILDLIHGNQVLVISGETGCGKTTQVAQFILDDEIERGRGSTTKIVCTQ
PRRISAISVAERVAAERAEPLGRSVGYQIRLEKVMSRDYGSMLFCTTGLLLQYMQGDPAL
RDFSHIILDEIHERNTESDFIITLLKQVIPKRPDLKVILMSATLNSETFARYYDNCPNIH
IPGFTYPVREFYLEDILEVTRFRFPPAQKLPDNYKKHMKKFKEMKEKASDFEGFVEPAVR
QMEAEGSYPPYVTNELRNPNSEVLSLELIQELLVWISSAKGPGAILVFLPGMMDISKLNK
SLLESGKFPSHRFHIYPLHSRLPTVDQRLIFRPPVPGVRKIIIATSIAETSITIEDVVFV
VDCGRTKLTRFDIAKNLETLEPEWISMANAKQRRGRAGRVQPGEVYRLYTRAREMTFDQY
PTPEMLRTPLEQVILQAKILQLGRVEVFLGSVIDPPEDRAIHLSLELLRTLNALDANEHL
TPLGYHLAKLPLDPRTGKMVLWASMFSCVEPVFGIAASLAFKDAFYCPLGKEEEANRAKL
DLGMGHYSDHIALAEAVRQYERALRSRNAGRFCSENFLSWNTLKLLVDMKGQFARHLYDM
KFLESEDPSDERSNRNSHNFAMIKAIVCAGLYPNIATVKNHGNFPKLKTSEDGTVKIHPS
SVNARAKHLPSPYVTYFLKQKSTAIYLHDTTCVNEAALIFAAPKSSIRAQGQRSLIVLND
SISFLCKQTTAGIIQRLREEMDKLLEHKITHPGSIKEQSQEDTVIRAIIELVSESDASVD
LDVGRYRRTNY
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggttttcgtggactgatcagcgagggggtggacactcccgttacggacagtca
ggagacccagcccccggcaactcccacgatcgtcgtcacaacggcgtcggtcacccccgt
ggcggaggtcgaggtcgaggtcgcggtggtcacccacccggtctaaaaggcaaggaaata
ggtttatattaccgcgacaaagcccgtaaaaacgatgcaaaagagcactacttctccctc
gccccgatggtcgaggagaccgtggagaccctcctgacccgcttgaaaaccccctacgcc
caggagtccgactcgccggacgaggcgaccgactacttcaacgacaaatacaaccacatc
aaagattcccaattcaagcgaaagtttctcgacattgtttccgggagtattcaacagaac
ctgtctcgcgcgttattaatgacttcaaaactgataaaaaacgataaaatcgacaaacaa
ttaatagacgaacaaagcgaccgagaatctctcgatgattatcaacgaatgttggacttt
cgttcgaaattgccgtcctacaaaatgcgtgaggaaattctcgatctgatccacggaaat
caggttctcgtgatcagcggtgagacgggttgcggtaaaacgacgcaagtagctcaattt
atcctagacgatgagattgagaggggccggggtagcacgacgaaaatcgtgtgcacgcag
ccgcgaagaatatccgcgatttcggtggccgagagagtggccgcagagcgtgctgagccc
ttaggtagatccgtcggttaccaaatacgtctggagaaggtcatgtccagggattacggt
agcatgctcttctgcacgactgggctccttctccagtacatgcagggggatcccgcattg
cgggacttctcccacataatcctcgacgaaatacacgagcgaaacacagagagcgacttc
ataatcactctcttgaagcaggtcatccccaaacggccagacctcaaagtcatcctgatg
agcgctaccctgaactctgagacttttgctcgttactacgacaactgtcccaacatccac
atcccagggttcacctatcccgtcagggagttctacctcgaggacatcctcgaggtgacg
aggttccgattccctccggctcagaagctccctgacaactacaagaagcatatgaagaag
ttcaaggagatgaaggaaaaggcgagtgatttcgagggtttcgttgagcccgcggtgagg
cagatggaggccgaggggtcgtaccccccttacgtgaccaatgagctgcgaaatccgaac
agcgaagtgctgtcgttggagttgattcaggaacttttggtgtggatttcgtcggcgaaa
ggccccggggccattctcgtgtttctaccggggatgatggacatatcgaagcttaacaag
agtctcctggagtcgggaaagttcccctcccacaggttccacatttacccccttcactcg
cgacttccgacagtcgatcagcgactgattttccgacctccggtgccgggtgtcaggaag
attatcattgcgacgtcaatcgccgagacgtccatcactatcgaggatgttgtgttcgtc
gtggattgcgggcgaacgaaactcacgagattcgatatcgcgaagaacttggagacacta
gagcccgagtggatctcgatggcgaatgccaagcagaggagggggagggctgggagggtt
cagcctggagaggtttacaggttgtacacgagagcgagggagatgacgttcgatcaatac
ccgacgccggagatgttgaggacacctctggagcaggtcatcctgcaagcgaagatattg
cagttaggaagggtcgaggtcttcctcgggagtgtgatcgatccgccggaggatcgggcg
attcacctctccttggagctactgagaacccttaacgctctcgatgctaatgagcacctg
acgcctctggggtaccatctcgcgaagctacctcttgaccccagaacggggaagatggtc
ctgtgggcgtccatgttctcctgtgtggagcctgtcttcgggattgctgctagtctggct
tttaaggatgctttctactgccctctcgggaaggaggaggaggcgaacagagccaagttg
gatctcgggatgggacattacagcgatcacattgcactcgctgaagctgtgaggcagtac
gagagggctttgcgatccagaaacgccgggaggttttgctcggagaacttcttgtcgtgg
aatactctgaagctgctggtggacatgaaggggcagtttgcgaggcacttgtatgacatg
aagttcctggagagtgaggaccccagtgacgagcggtccaacaggaattctcataacttc
gcgatgatcaaggcgattgtctgcgcaggattgtatcctaatattgctactgtcaagaat
catgggaactttccgaagctcaagacgtctgaggatggtacagtcaagattcatcctagt
agtgtcaatgcaagggccaaacacttgccttcgccgtatgtcacgtacttcctcaagcaa
aagtcaacggctatttatttgcacgacacaacctgtgtcaatgaagcagcactgattttc
gctgcaccgaagagctccatcagagctcaaggccagaggtctttgattgtgcttaatgat
tctatctcgtttctgtgcaaacagacgactgctggcatcattcagaggctcagggaggag
atggataaattgctggagcacaagattacgcatccggggagtattaaggagcagtcgcag
gaggatactgtgataagggcgattattgaacttgtctcggagagtgatgctagtgttgac
ttggatgttgggaggtatcgtcgtacgaattattga
DBGET
integrated database retrieval system
