Diachasma alloeum: 107039408
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Entry
107039408 CDS
T07663
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dam
Diachasma alloeum
Pathway
dam03020
RNA polymerase
dam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107039408
09124 Replication and repair
03420 Nucleotide excision repair
107039408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dam03021
]
107039408
03400 DNA repair and recombination proteins [BR:
dam03400
]
107039408
Enzymes [BR:
dam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107039408
Transcription machinery [BR:
dam03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107039408
DNA repair and recombination proteins [BR:
dam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107039408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
107039408
NCBI-ProteinID:
XP_015114488
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MYADEGGPEQYEDDDPEEISSKLWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRI
VEDSPQIDLQAEAQHTSGEIESPIRHLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNL
TYSAPLYVDITKTIVKEGEDPVETQHQKTFIGKIPIMLRSKYCLLASLSDRDLTELNECP
LDPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKFAYKAEIRSCLEHSSRPTSTLWIN
MMAKSGASIKKSAIGQRIIAILPYVKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMM
EMVKPSLDEAFVVQEQNVALNFIGTRGAKPGVTKEKRIKYAREILQKEMLPHVGISDFCE
TKKAYFLGYMVHRLLSAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMY
AQKFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST
LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQP
SPILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDIIV
SEVSMIRDIRDREIRIYTDAGRISRPLLIVENQQLLLKKRHIDMLKERDYNNDGWQELVG
SGVVEYIDTLEEETVMIAMSPEDLRQDKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHN
QSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGIN
SIVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAESKRIGDQEEQFEKPTRQTC
QGMRNAIYDKLDEDGIIAPGIRVSGDDVVIGKTITLPEADDELDSTTKRFTKRDASTFLR
NSETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFS
CEGLTPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISTLLQE
YGYQLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEG
RARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFEC
KGCKNKTQISQVRLPYAAKLLFQELMAMNIAPRLMVN
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcggacgaaggcggtccagagcagtacgaggatgacgatcccgaggagatctcc
tcgaagctgtggcaggaggcctgttggatcgtcatcaacgcctacttcgacgagaagggt
ctggtgcgtcagcagctggacagtttcgacgagttcatcgagatgtccgtccagaggatc
gtcgaggactccccccagatcgacctccaggccgaggcccagcacacatccggcgaaatc
gagagccccatcaggcatctcctcaaattcgagcaaatttacctgtcaaaacccacccac
tgggagaaggacggtgcaccttcccccatgatgcccaacgaggcgcgtctacgaaacttg
acttactcagctcctctctacgtagacatcacgaagacaatcgtgaaggagggtgaggat
cctgtggagacccagcaccagaagacattcatagggaaaatcccaatcatgttgagatcg
aagtactgtttactcgccagtctctcagatcgtgatctgacggagttgaatgagtgtcct
ctggaccctgggggctacttcatcataaacggttcagagaaggttctcattgcccaggag
aaaatggccaccaacactgtttacgtcttcagcatgaaggacggaaaattcgcgtacaaa
gctgagattcgttcgtgcttggaacacagctctcgtcccacctcgacattgtggatcaac
atgatggcgaagagtggagcaagcataaaaaaatctgcgattggtcagaggatcattgcc
attcttccctacgtgaaacaggagattcccattatgattgtcttcagggctctggggttc
gtggctgacagggacatcctggaacacattatctatgatttcgatgatcctgagatgatg
gagatggtcaagccgtcgttggatgaggcctttgttgttcaggagcagaatgtcgcgttg
aacttcattggtaccaggggagctaagcctggtgtcacgaaggagaaacgtatcaagtat
gcgagggaaattctgcagaaggaaatgctgccccatgtgggaatcagcgacttttgtgag
acgaagaaggcttattttcttggatacatggtgcaccgtctcctgtcagcagccctgggt
cgccgagagctcgacgatcgtgatcactacgggaacaaacgtctcgacctcgcgggtccc
ctcctggccttcctcttccgaggtctattcaagaacctcatgaaagaagtgagaatgtac
gcccagaagttcatcgaccgcgggaaggacttcaacctcgagctggcgatcaaaacaaag
atcatcaccgacggtctgcggtactccctggccactggcaactggggagaccagaagaag
gctcaccaagcaagagccggagtgtctcaggtattgaacagactgacatttgcatcgacc
ctctcccatttgagaagagtgaactctccaatcggtcgtgatggcaagctcgccaaaccc
agacagctccacaacaccctctggggaatgttgtgccccgctgagaccccagagggagct
gctgttggtctcgtgaagaacctcgccctcatggcgtacatcagcgttggctcccagcca
tcaccgatcctcgagttcttggaggagtggtccatggagaatctcgaggagatagctccc
agtgccatcgcagatgccaccaagatctttgtgaacggctgttgggtgggcatccaccga
gatcccgaccaactgatggcaacactacgaaagcttcgacgtcagatggacatcatcgtc
tccgaggtgtctatgatcagggacatcagagaccgagagatcaggatctacacagacgct
gggaggatcagtagacccttgctgatcgtcgagaaccagcagttgttgttgaagaagaga
cacattgacatgctgaaggagagggactacaacaacgatggctggcaggagctggtgggc
tctggagtggtcgagtacatcgacactctggaggaggagacagtgatgattgccatgtcc
ccagaggacttgcgacaggacaaggagtatgcttactgcaccacttacactcactgcgag
atccatccagccatgatcctcggagtgtgcgcctcgattatccccttccctgatcacaac
cagagccccaggaacacttaccaaagtgctatgggtaagcaagccatgggggtctacatc
accaacttccacgtgaggatggacacgcttgctcatgtcctctattatccccacaaaccc
ttggttacgactaggtccatggagtacctcagattcagagagctcccagctggaatcaac
agcatcgtcgccattctctgttacactgggtacaaccaggaggacagtgttattctcaac
gccagtgctgttgagaggggcttcttcagatccgtcttctaccgatcctacaaggatgca
gagtccaagagaattggagatcaagaagagcagtttgaaaagccaaccaggcaaacctgt
caaggcatgaggaatgcaatctacgataaactggatgaggatgggataatagcccctggc
attcgtgtctccggggatgacgtggttattggaaaaacgataaccctaccagaggctgac
gatgaacttgacagcaccaccaagcgcttcacaaaacgagacgcctcgactttcctcagg
aacagtgagactggaattgtggaccaggtgatgctgactttgaacagtgaaggctacaag
ttctgtaagattcgagtgaggagtgtgagaattccacagattggggacaagtttgcctct
agacatgggcaaaagggtacctgtgggatacagtacaggcaggaggacatgccgttctct
tgtgaaggattgacaccagatattatcatcaatcctcacgctatcccctctcgtatgacc
attggtcacttgatcgagtgcattcaggggaaggtgtcctctaataagggggagattggt
gatgcaactcctttcaatgatgctgtcaatgtgcagaagatctcgactcttcttcaggag
tatgggtaccagttgagggggaatgaggtgatgtacaatggccacactgggaggaagatc
aatgctcaggtcttcttgggtccaacgtactaccaacgtttgaagcacatggtggatgac
aagattcatagcagggccaggggtcctgtgcagatcctggtcaggcagcccatggagggt
cgtgccagggatggcggtctgcgttttggggagatggaacgggactgccagatctctcat
ggggctgctcagttcctcagggagagactcttcgaggtctctgatccttacaggattcat
atttgtaatttctgtgggctgattgctattgccaatttgaggaataatacgtttgagtgc
aaggggtgcaaaaataagacgcagatatcgcaagtgagacttccttatgctgctaaactg
cttttccaggagctgatggctatgaatatcgcacccaggctcatggttaattag
DBGET
integrated database retrieval system
