Diachasma alloeum: 107040205
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Entry
107040205 CDS
T07663
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
dam
Diachasma alloeum
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dam03021
]
107040205
03036 Chromosome and associated proteins [BR:
dam03036
]
107040205
Transcription machinery [BR:
dam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107040205
Chromosome and associated proteins [BR:
dam03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
107040205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
Spt6_S1
Tex_central_region
OB_RRP5_4th
Tex_YqgF
S1_RRP5
Tex_N
HTH_10
Motif
Other DBs
NCBI-GeneID:
107040205
NCBI-ProteinID:
XP_015115657
LinkDB
All DBs
Position
Unknown
AA seq
1705 aa
AA seq
DB search
MADFLDSEAEESEEEQELDHNERKKLKKVKAMEESDEDDEDDEDRIREELKDLIDDRPID
ESEGEDSDGSEGKKRKKSDDEDFDDRLEDDDYDLIEENLGITVERKRFKRLKRVQDRESD
DEEEHHPGEERDAIANELFEGGSGDERDALVEDERRSERSHRQEPETFDEEGSEGEYSDA
DDFIVDDEGRPIAERRRKKKPIFSDAALQEAQDIFGVDFDYDEFGKYDEAGYEEEEEEEE
DEYVEDDGEGERPRRPKKTPKKKPTKKSIFEIYEPSELKRGHFTDMDNEIRITDIPERMQ
LRSMPVTSVPEGSDELDQEAEWIYKQAFCKPTISVQDAHLNAEAKDRARKGPQTVGKIKK
ALDFMRIQHFEVPFISFYRKEYVLPELNINDLWKVYKYDAKWCQLRQRKENLLALFEKMR
NHQLDLLMKDPDAPLPDSVRVIKDEDIERLKNVQTSEELNDVHQHFMLYYSHDIPAMQES
ARQKEKEAKRQAKIAERKQKLLEAEENGEDPPPEEEIEIEEEEENDENLKHAVRTGPYAI
CRKAGLDTFAKKFGLTPENFAENLRDNYQRHEVDQEPTEPLVVAQDFVGPKFKSPEEVLK
AVKLMVAIQLAREPLVKKSVREMYMERAKISVTPTKIGIKMIDETHPIYTIKYLKDKPVR
DLVGDQFLRLVMAEEDKLITLTMSNTIEGNTSSNYVDEMKQLYIRDEFSKNVQDWNNLRV
GSVEMALNEMVIPALKKELRANLIAEAKESVMRACCRKMYNWLKVAPFTCSFPEEEDDEW
DTSKGLRVMGVSYVPDYSQAAFACLIAPDGECTDYLRLPHLLKRKNSFRKEEKVMKEADL
LAIRNFIATKKPHVVVVGGESREALMVVNDIKECITALVEEEQFPAISVEVGDNDLAKIY
ANSNKGTAEFRDYPSLLREAISLARRLQDPLVEFSQLCTADDEILCLKYHNLQDQLPKEE
LLENIYLEFVNRVNEVGVDVNKAVQQAYAGNLVQFVCGLGPRKGQALIKTLKQTNQRLEN
RTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDA
LEYDDEDANPAGAVDEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNCRYK
DLRTPYQSPSPEKLFDILTKETPETFYIGKRIEAIVTGISRRKPQGEQLDQANPVRNDET
GLWQCPFCLKNDFPELSEVWNHFDAGACPGKATGIKLRLDNGISGYIHIKNLSDKHVADP
EERVAMGQTVNCRVIKIEVDRFSVECTSKSSDLADKNHEWRPQKDPFYDNEAELKDMKVE
DETKKVKQTQTYVKRVIVHPSFHNISYSEAEKLMRTMKQGEAIIRPSRQGADHLTVTWKV
TDDIYQHIDVKEEGKANEFSLGKSLWIGSEEFEDLDEIIARHVNPMAAYASELLDFKYYK
PGVNGLKDKAEEILKAQKKENPGGIPYIVSAVKKCPGTFLLSYLPRDRVVHEYVQVTPEG
FKYRRQIFGRVNDLFRWFKEHFREQIPGQNTPSTPRGAQTSRTPYHTTPGVAMNQEAIHR
VAQNLPHHMLHSLSQVANQTPHYPPHTPGAAGAAYVYPNTPYTPSGQTPYMTPYATPRNH
QFTQPAPPHRSTPSHRPTPQISAAAQEAMDWKKAAEAWARLKTTPRYDGKRSRTPSNKSP
RTPQTNSSPRSMSLSGDCTPLWDES
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttcctggattcggaggccgaggagagtgaggaggagcaagagttggatcac
aatgagaggaagaagctgaaaaaggttaaggctatggaggagagcgacgaggacgacgag
gatgatgaagatcgaattagggaggaattgaaggatttgattgatgatagacccattgat
gagagcgagggggaggacagtgatggctcggagggaaagaaacgcaagaagagtgatgat
gaggactttgatgatcgacttgaggacgacgactatgatctcattgaggagaatctgggg
atcactgttgagaggaaacgattcaaaaggctgaaacgagtacaagatcgagaatctgat
gacgaggaggagcatcatcccggagaggagagggacgccatcgctaatgagctgttcgaa
gggggatctggtgatgagagggatgcactagtggaggatgaacggcgcagcgagagaagc
caccgacaggagcccgagaccttcgacgaagagggaagcgagggcgagtactcagacgcc
gacgacttcatcgtggacgacgagggtcgccccatagccgagcgccgacgaaagaagaag
cccatcttctcggacgcagccctccaagaggcccaggacatcttcggcgtggactttgac
tacgatgagttcggtaaatacgacgaggccggctacgaggaggaagaggaggaggaggaa
gacgagtacgtcgaggacgacggcgagggcgagcgccccagacgccccaagaagacccca
aagaagaagcccacgaagaagagcatcttcgagatctacgagcccagtgaactgaaacgt
ggtcacttcacagacatggacaatgagatccgaatcacagacattccggaacgaatgcag
ctccgatcgatgccagtgacatctgttccagaaggatccgacgagctcgatcaagaggcc
gagtggatctacaagcaagctttctgcaagccaacgatatccgttcaggacgcccacctg
aacgccgaggccaaagatcgcgcgcgcaagggtccccagacagttggaaaaatcaagaaa
gccctggacttcatgagaatccaacacttcgaggtgcccttcatctccttctacagaaag
gagtacgtcctcccagagttgaacatcaacgatctctggaaggtctacaagtacgacgcc
aaatggtgccagcttcgtcagcgtaaggagaacctcctggccttattcgagaagatgagg
aaccaccagttggatctgctgatgaaggatccagacgcaccactccccgactccgtgcgt
gtcatcaaggacgaggacatagagcgtttgaagaacgtgcagactagtgaggaattgaac
gatgtgcatcagcacttcatgctgtactactcccacgacatcccagctatgcaggagtct
gcgagacaaaaggagaaggaggctaagcgccaggcgaagattgctgagcgcaagcagaag
ctgctggaggccgaggagaacggtgaggatccacccccagaggaggagatcgagatcgag
gaggaagaggagaacgacgagaacctcaagcacgcagttcgaacaggcccctacgccatc
tgcagaaaagcaggtctggacacttttgccaagaagtttggactgacccctgaaaacttt
gctgagaatctccgagacaattaccagcgtcacgaggtggaccaggagcccacagagcca
ctggttgtggcgcaggacttcgttgggccgaagttcaagtcccctgaggaggtcctcaag
gctgtcaaactgatggtggctattcagctggctcgagagcccttggtcaagaaatcggtc
agggagatgtacatggagagggcgaagatcagtgtcacacccaccaagattggaatcaag
atgattgacgaaactcatcccatctacaccatcaagtacctcaaggacaaacctgttcgt
gatctggtgggtgatcagttcttgaggctggtgatggctgaggaggacaagctcattaca
ctgacgatgagcaacaccatcgagggaaataccagcagtaattacgtggacgagatgaag
cagttgtacatcagggatgagttcagtaaaaacgttcaggactggaataaccttcgagtt
ggaagtgtcgagatggctctgaacgagatggtgataccagctctgaagaaggaacttcgt
gctaatctcattgctgaagccaaggagtcagtgatgagggcgtgctgcaggaagatgtac
aattggcttaaagtggctcccttcacgtgttcatttcctgaagaggaggacgacgagtgg
gacacgagcaagggactcagagtgatgggagtctcgtacgtacctgactactcccaagca
gctttcgcctgtctcatagcccctgacggtgaatgcacagactaccttcgtctcccccac
cttctgaaacgcaagaacagtttcaggaaggaggagaaggtcatgaaggaggcagacctg
ctagccattcgtaattttatagctacgaagaagccccacgttgtggtcgttggtggagag
tccagggaagctctgatggttgtcaacgacatcaaggaatgcataacagctctcgtcgag
gaggagcagttcccagccatcagtgtagaagtgggggacaacgatctagccaagatctat
gccaacagtaacaagggaactgctgagttcagggactaccctagtcttcttcgagaggct
atatctcttgctcgacgtcttcaggatccactcgttgaattctcgcaattgtgcactgct
gacgatgagattctctgccttaagtaccacaacctccaggatcaactgcctaaagaggaa
ctattggagaacatttacctggagtttgtgaacagagtcaacgaagttggtgttgatgtc
aacaaggcagtgcagcaggcgtacgctggcaatctagtgcaatttgtctgtggtctgggc
ccaaggaagggccaggctctcatcaaaacgctcaagcagactaatcaacggttggagaac
agaacacagttggttactgcctgtcacatggggccaaaggtcttcataaactgtgctggc
ttcatcaagatcgatacgaatagtcttggggacagcacagaagcctacgtggaggtactg
gacggttcgagggtccaccctgagacgtacgagtgggcgaggaagatggcggttgacgca
ctggagtacgacgacgaggacgccaatcctgcaggggcagttgacgaaattctcgagtcc
ccggagaggctaaaggacctcgatcttgacgcattcgccgaggagctggagagacaggga
ttcggcaacaagtgtgtgacactttatgacatcagggctgagctcaactgcaggtacaag
gacctgaggacaccgtatcaatccccaagccctgagaagctgttcgatattctgactaag
gagacaccagagactttttacattggaaagaggatcgaggcgatagtcacgggaatcagc
aggagaaaaccccagggggagcagctggaccaggcgaacccagtgaggaatgacgagact
ggactctggcagtgtcccttctgcctcaagaatgactttccagagttgtctgaggtctgg
aatcattttgacgctggagcttgtcctggaaaagctactgggatcaagctgcgtcttgac
aatgggatctctggttacattcacattaagaatctttctgataaacatgtggcggatcct
gaggagcgagtggccatgggtcagacggtcaactgcagagtcattaagatagaagtcgac
aggttcagtgtcgagtgcacaagcaagagcagcgatctcgctgataagaatcacgagtgg
agaccgcagaaggaccccttctacgataatgaagctgaactgaaagatatgaaggtggag
gatgagacgaagaaggtcaagcagactcagacgtacgtgaagcgtgtgattgtccatcca
tcattccataatatcagttattcagaggctgagaagctcatgaggacgatgaagcagggg
gaggccatcataagaccgagcagacagggggcggatcacttgacagttacttggaaggta
actgacgacatctatcagcacatagacgtcaaggaggagggtaaagcgaacgagttctcc
ctggggaagagtctgtggatagggtctgaagagtttgaagacttggatgagataattgcg
aggcatgtgaaccccatggcagcttatgcttcagaactactggacttcaagtattataaa
ccaggggtgaatgggctgaaggacaaggctgaggagattctcaaggcccagaagaaggag
aatcctgggggaattccttacatcgtgtcagcagtgaagaagtgtccggggacttttctc
ctgtcttatctgcctagggacagggtcgttcatgagtacgtccaggtcactccagagggc
ttcaagtacaggagacagatctttgggcgggtcaatgatctcttcaggtggttcaaggag
cacttcagggagcaaatacctggacaaaacacacccagcactcccaggggtgcccagact
tccagaacgccttatcacacgactccaggggtcgccatgaaccaggaggccattcacagg
gtcgcccagaatcttccacaccatatgcttcattcgttgtctcaagtggccaatcagact
cctcattatcctccacacactcctggagctgctggggctgcttacgtctatccaaatact
ccgtacacaccttctggacagactccatacatgacgccatatgccacccctaggaatcat
cagttcacacagccagcacctcctcatcggtccactccctcgcacagacccactccccag
atctctgctgctgctcaagaggccatggactggaaaaaagctgctgaagcttgggctagg
ctcaagaccactccgaggtacgatggaaaaagatctagaacaccctcgaacaagtccccc
agaacgccacagactaattcaagccccaggtccatgtctctcagtggagactgcacacct
ctctgggacgagagctag
DBGET
integrated database retrieval system
