Diachasma alloeum: 107040364
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Entry
107040364 CDS
T07663
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dam
Diachasma alloeum
Pathway
dam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107040364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dam03041
]
107040364
03009 Ribosome biogenesis [BR:
dam03009
]
107040364
Enzymes [BR:
dam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107040364
Spliceosome [BR:
dam03041
]
Complex A
U2 snRNP components
U2 related factors
107040364
Complex B
107040364
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107040364
Ribosome biogenesis [BR:
dam03009
]
Eukaryotic type
90S particles
Helicases
107040364
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WD40_Prp19
Beta-prop_IFT122_1st
WDR55
Beta-prop_THOC3
WD40_CDC20-Fz
WHD_HA2
Beta-prop_EIPR1
DSE1_N
Beta-prop_WDR5
Helicase_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_EML
DEAD
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_NOL10_N
AAA_22
Beta-prop_RIG_2nd
AAA_19
nSTAND3
SRP54
Beta-prop_WDR75_1st
Cas3-like_C_2
MIOS_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
T2SSE
Beta-prop_DCAF12
Beta-prop_DCAF4
AAA_25
ABC_tran
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
107040364
NCBI-ProteinID:
XP_015115929
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MGENVQGTFTSEKISKIRWRREDFTEAKSFVTGSWDNPINNIVHWTFETSEDDETYPVVD
STFSFQGDVTEIEFIDKNAFVASSSIGSVKLLGINEAPYGEFRELMSWEFIHQFSTGDHA
PCTALTTFNQDIATVGEDGRINLLTAQERKPVRTIENADSCSLVCIDFLRHNEILTSNSR
GHMKLWDLRNDRDTPATTFMLPDQLKTEATDIAHHPTQRHIVAAGGGDGSLSVWDLRQST
YPISQLLAHSRAIAEVMFHPDRPDNLFTCSVNGELWHWNDTQGSKLKLEGGESHWLTTRG
IDGKMNVSALCAPMHKPVNSIDIDRSTLLFGCDNEAMDDGSDTASSSSALTPSLASSKAP
SQLNPYTHLPYTPRYYEFLKKRITLPVFEYRADFMRLLAQHQCIVLVGETGSGKTTQIPQ
WCVEYSMSMGAKGVACTQPRRVAAMSVAQRVSEEMDVPLGEQVGYSIRFEDCSSPKTVLK
YMTDGMLLREGMSDPMLEAYQVILLDEAHERTLATDLLMGVLKEVIKQRSDLKLVIMSAT
LDAGKFQQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEDVPGDLLL
FLTGQEEIEEACKRIKREMDNLGPEVGELKCIPLYSTLPPNLQQRIFEAAPPNKANGAIG
RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAG
RTRPGKCFRLYTEKAYKNEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPE
TLMRALELLNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAML
SVPQCFVRPNEAKKAADDAKMKFAHIDGDHLTLLNVYHAFKQNMEDPQWCYDHFVNYRSL
KSGDNVRQQLSRIMDRFSLKRTSTDFTSKDYYINIRKALVDGFFMQVAHLERTGHYLTIK
DNQIVQLHPSSCLDHKPEWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYDLQNFPQC
EAKRQLEVIQARLDSKQYQEGF
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagaatgttcaggggaccttcacgtccgagaaaatctcgaaaattcggtggcgc
agggaggatttcactgaggccaagtcctttgtcaccggcagttgggacaatcctatcaat
aatatcgttcattggacatttgaaacttccgaggatgatgagacgtacccagtagtggat
tccacgttctcttttcaaggggatgtaacagaaattgagttcatagacaaaaatgcattc
gtggcttcttcctccatcggttcagtgaaactcctaggaataaatgaagctccttacggt
gaattcagggagctcatgtcctgggagtttatccaccagttcagcactggtgaccacgcg
ccgtgcacggcattgacgacattcaatcaggacattgcgactgtgggagaggacggaagg
ataaatctcctgacagcccaggagaggaagcctgtgaggactatagagaatgccgacagt
tgttccctagtctgcatcgatttcctgagacacaatgagatcctcacgagtaatagcaga
ggccatatgaagttgtgggacttgaggaatgatcgagatacaccagccaccactttcatg
ctgccagatcaattgaagaccgaggcaacggatattgctcaccacccaacccagaggcac
atcgtggcagcaggtggtggtgatggtagtttgagcgtctgggaccttcgccaaagcaca
taccccatctctcaactcctcgcgcactcacgagctatcgcagaagtgatgttccaccca
gatcgaccggacaatctattcacgtgttctgttaatggggaattgtggcattggaatgac
acccaaggatcaaaactaaagctggagggcggcgagagccactggctgacgaccagagga
attgacgggaaaatgaatgtctcagctttgtgtgcaccaatgcacaaacccgtaaacagt
atcgacatcgacaggtcaacattactattcggttgtgataacgaagctatggacgatgga
tcggacaccgcatcctcctcgtccgccctgacgccgtcgctcgcctcctccaaagccccg
tcccaactgaacccctacacgcacctcccgtacaccccgcgttactacgaattcctgaaa
aagcgtataaccctccccgtattcgagtaccgggcggactttatgcgcctgctagcccag
caccagtgcatagtcctggtgggtgagaccggctccgggaaaacgacgcagataccccag
tggtgcgtcgagtactcgatgtcgatgggcgcaaaaggtgttgcatgcacccagccccga
cgagttgcagccatgtcagtggcccaacgagtctccgaggagatggacgtacccctgggc
gagcaggtgggctacagcattcgtttcgaggactgcagttccccgaagacagttctcaaa
tacatgaccgatggtatgctgctgcgcgagggcatgtccgacccaatgctggaggcctac
caggtgattctcctcgacgaggctcacgagaggactctagccactgacttgctgatggga
gtgctgaaggaagtgataaaacagcgctcagacctgaagctcgtcatcatgtcggcgacc
ttggacgctggaaaattccagcagtacttcgacaatgcgccactgatgaatgtccctgga
cgaacgcatccggtggagatattctacacgccggagccggagagggactacctggaggct
gccatcaggactgtcattcagatccacatgtgcgaggacgtccccggggatctgctgctg
tttctcactggtcaggaggagatcgaggaggcgtgcaagaggatcaagagggaaatggat
aatttggggcccgaggtgggggagctcaagtgcattcccctgtactcaacgcttccccca
aaccttcagcagaggatattcgaggctgcaccgccgaataaggctaatggggccatcggg
aggaaggtcgtggtctccactaatatcgctgagacctccctgacaatcgatggagttgtc
tttgtcattgatccgggcttcgccaagcagaaggtctacaatcccaggatcagggtggag
tcgctgctggtgtcgccaatcagcaaggcgtcggcacagcagagggctggacgggccggc
agaacgagacccggcaagtgcttcaggctgtacactgaaaaggcgtacaaaaatgaaatg
caggataacacttatcctgagatactcaggtctaatttggggagtgtcgtcttgcagctg
aagaaactggggatcgacgatctcgttcattttgatttcatggatccaccggcacctgag
acactcatgagggctctggagctgctcaattatcttgctgctctcgatgatgatggcaat
ttgaccgacctgggggctgtcatggctgagttcccgctcgatccgcaactcgcgaagatg
ttgattgcttcgtgcaatcataattgcagtaatgagattctcagcatcactgctatgtta
tcagtcccacagtgttttgtgaggccaaatgaagctaaaaaggctgctgacgatgctaaa
atgaaattcgcacatattgatggagatcatctgaccctgcttaacgtttatcacgccttt
aaacagaacatggaagatccccagtggtgctacgatcacttcgtcaactacagatccctg
aaaagtggtgacaatgttcgacaacagttgagcagaatcatggacagattctcgttgaag
agaacctccacagacttcacgtcgaaggactattacatcaacattcgaaaagctcttgtc
gatggattcttcatgcaagtggctcatctggagaggactggacactatttgaccataaag
gacaatcaaattgtacaactgcatcctagcagttgtctagatcacaaaccagagtgggtg
atatacaatgaattcgtcctcacgacgaagaattatattagaactgttactgatataaaa
cctgaatggctattgaaaatagccccgcagtactacgacctacagaatttccctcagtgc
gaggcaaagagacaattggaggtgatccaagcaagattagattcaaaacagtatcaagaa
ggcttctaa
DBGET
integrated database retrieval system
