Diachasma alloeum: 107041017
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Entry
107041017 CDS
T07663
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dam
Diachasma alloeum
Pathway
dam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107041017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dam03019
]
107041017
Messenger RNA biogenesis [BR:
dam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107041017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
107041017
NCBI-ProteinID:
XP_015116855
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MNNKVNNEQVNEDDDDSARENDSEKTPEGEKEEILPGFSSFDDFVKTGFTVLKAGIKAAN
SLPTGENFTYYSCFPTFRNIRHEEIKKLLTSMQCIVECTGASGSMKRGDQEEKFELLTEA
NDLLLDRATACMDKEAGVSKEPNVQLITTQTKQTNYGSWNTSVIQSTSSNPQEPLSSAQG
IRLLAAKNIHRPQLSFKDKIDNSAKPWEPRIKDKPNALKPLSIHLIDTEEGLAYSHPYEW
ELDKLTYQDHQLTPRTPIKYRPLSETPLIVIEKPQDLKILLNDLRNYEEISVDLEHHSYR
TFQGITCLMQISTRDTDYLIDTLSLRSDLHALNEIFTKPSVLKVFHGADSDIQWLQRDLS
LYIVNMFDTHQAAKHLNLPYLSLAYLLKTHCNIDPNKHFQLADWRIRPLPEELMKYARED
THYLLYIKDILTNALIEAANGQANILRAVYDRSNEICKRIYRKPVCLEDSHMSIYRKSQK
MFNNRQLHALKELYSWRDETARQEDDSYGYVLPNHMLLNIAETLPREMQGILACCNPIPP
LVRQNLLKLHKLILRAREQPLIKPVLLEQDMRQRLAQRHQVETDVWMLSPHDMSNNEVQA
NLPCLLDANGVRSFGETDLEARPKVTIFEDEERLGDGGLGERLRRTKTLFVSPFERYKRV
LPMVAAQEARDLAREEREREERAAAEKAQNEETQQSIDRVRQHFLEVTRDHREDFDGGRE
QEEREPLSNMPRGKKRKRESEVDDDVESVNKKFDVSTPKPARDSTLADTFKGRRIQNEED
EVDSRMDDKRKPEGRVLKSVRVYSGSADKTKVQKLKNRKELTQKGMLPNPNFDYKAVDFS
SFQGGSKNDLAKTTVFQQKQFKDKITKGKKKKKQKLGI
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaaagtgaataatgaacaagttaatgaagacgatgatgattctgctcgagag
aatgattcggaaaaaacgccagagggtgagaaagaagaaattctcccaggattttccagt
ttcgatgactttgtcaagacaggcttcacagttctcaaagcgggaataaaagcggcgaac
agtctcccaacgggtgaaaatttcacctactactcgtgcttccccaccttcagaaacatt
cgccacgaggagataaaaaagctcctcacctcaatgcaatgcatagtagaatgcacaggt
gcatcgggtagcatgaaacgaggcgaccaagaagagaaattcgagcttctaacagaagcc
aacgacctcctcctggaccgcgcgacagcctgcatggacaaagaggcaggcgtgtcaaaa
gagcctaacgtgcaattgataacaacccaaacaaagcagacaaactacggctcatggaac
acctcagtaatccaatcgacctcgagcaatccgcaggagccactgagcagtgcccaggga
attcgtctgctggcagccaagaacatccacagaccccagctatccttcaaagacaaaatc
gacaacagcgcgaagccctgggagcccagaataaaagacaaaccaaacgccctaaaaccc
ctgtcaatccacctgatcgacaccgaagagggtctagcctacagtcacccctacgagtgg
gagctggacaaactcacctaccaggaccaccaattgaccccaagaacccccataaaatac
cgccccctgtccgaaacccccttaatcgtgatagaaaagccccaagacctgaagattctc
ctgaacgacctccgaaattacgaggaaatatcagtggaccttgagcaccactcctacagg
accttccagggaatcacctgcctcatgcagatatccacgagagacacagactacctgata
gacaccctctccctgcgctcagacctccacgcgctgaacgagatcttcacgaagccctca
gtcttaaaagtctttcacggagcagacagcgacattcagtggctgcagagggacctctcc
ctgtacatcgtcaacatgttcgacacccaccaagccgccaagcacctgaacctcccctac
ctgagcctggcttatctgctgaagacccactgcaacatcgacccgaataagcactttcag
ctggctgactggaggattcgaccgctgccagaggagctgatgaaatacgccagagaggac
acccactacctcctgtacatcaaggatatcctcacgaatgcactgatagaagctgccaac
ggccaggccaacatcctgagggctgtctacgacagatccaacgagatttgcaagagaata
tacagaaagccggtgtgtttggaggacagccacatgagtatttatcgtaagagccagaag
atgttcaacaatcgtcagcttcatgctctgaaggagctgtactcgtggagggacgagaca
gctcggcaagaggacgacagctatggctatgtcctgccgaatcacatgctgttgaacatc
gctgagacactacccagggagatgcagggaattctcgcctgctgcaatcccattcctcca
cttgtgcggcagaatctactgaaattgcacaagttaattctgagggcgagggagcagccc
ctgataaaaccggttttgctggagcaggacatgaggcagaggctggcacagaggcatcag
gtggagacggacgtgtggatgctgtcgccacacgacatgagtaataacgaggtgcaggcc
aatcttccttgtttgctcgatgccaatggggtgaggagttttggggagacggatttggag
gctcgccccaaggtgaccatcttcgaggatgaggagaggctgggggatgggggacttggc
gagaggttgaggaggacgaagaccctgtttgtgagccctttcgagaggtacaaacgagtg
ctgccgatggttgctgcgcaggaggcgagggacttggctagggaggagagggagagggag
gagagggcggctgctgaaaaggcacaaaatgaagagactcagcagagtatcgacagggtt
cgccaacactttctcgaagtcacgagagaccacagggaagattttgatggcgggagggag
caagaggagagagagcctctcagtaatatgccaaggggtaagaagaggaaacgtgagtcc
gaggtcgatgacgacgttgaaagtgttaacaaaaagtttgacgtatctacgccgaagccc
gcgagggactccacactcgctgatacgtttaagggcaggaggattcagaatgaagaggac
gaagtggattcacgaatggacgataagaggaagccagagggaagggtactcaaaagtgtg
cgtgtttattcggggtcagcggacaagacgaaagttcagaagcttaagaacaggaaagaa
ttgacgcagaagggaatgctacccaatccgaatttcgactacaaagcggtggatttcagt
agcttccagggtggaagtaaaaacgatttagccaaaacgacggtctttcaacagaaacag
ttcaaagacaaaatcacgaaaggaaaaaagaagaagaagcaaaaactcggtatatga
DBGET
integrated database retrieval system